Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
CLTCL1P53675 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC30.98■■■□□ 2.55
CLTCL1P53675 AC053503.5-201ENST00000601508 636 ntBASIC30.98■■■□□ 2.55
CLTCL1P53675 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CLTCL1P53675 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CLTCL1P53675 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CLTCL1P53675 SLC29A4P1-201ENST00000398760 971 ntBASIC30.97■■■□□ 2.55
CLTCL1P53675 PLLP-204ENST00000569059 665 ntTSL 3 BASIC30.97■■■□□ 2.55
CLTCL1P53675 AC133552.2-202ENST00000575694 574 ntBASIC30.97■■■□□ 2.55
CLTCL1P53675 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CLTCL1P53675 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC30.97■■■□□ 2.55
CLTCL1P53675 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CLTCL1P53675 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CLTCL1P53675 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CLTCL1P53675 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC30.96■■■□□ 2.55
CLTCL1P53675 AF201337.1-201ENST00000520239 748 ntBASIC30.96■■■□□ 2.55
CLTCL1P53675 KLF13-207ENST00000560473 489 ntTSL 3 BASIC30.96■■■□□ 2.55
CLTCL1P53675 AC068338.2-201ENST00000563278 1430 ntBASIC30.96■■■□□ 2.55
CLTCL1P53675 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC30.96■■■□□ 2.55
CLTCL1P53675 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC30.95■■■□□ 2.55
CLTCL1P53675 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CLTCL1P53675 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CLTCL1P53675 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC30.95■■■□□ 2.54
CLTCL1P53675 CD99P1-205ENST00000527459 561 ntBASIC30.95■■■□□ 2.54
CLTCL1P53675 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC30.95■■■□□ 2.54
CLTCL1P53675 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
CLTCL1P53675 NFE2L3P1-201ENST00000588207 1959 ntBASIC30.94■■■□□ 2.54
CLTCL1P53675 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CLTCL1P53675 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CLTCL1P53675 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CLTCL1P53675 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC30.94■■■□□ 2.54
CLTCL1P53675 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC30.94■■■□□ 2.54
CLTCL1P53675 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
CLTCL1P53675 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC30.94■■■□□ 2.54
CLTCL1P53675 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CLTCL1P53675 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CLTCL1P53675 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CLTCL1P53675 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC30.93■■■□□ 2.54
CLTCL1P53675 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
CLTCL1P53675 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
CLTCL1P53675 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CLTCL1P53675 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CLTCL1P53675 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC30.92■■■□□ 2.54
CLTCL1P53675 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
CLTCL1P53675 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC30.92■■■□□ 2.54
CLTCL1P53675 AC139530.1-201ENST00000575312 1977 ntBASIC30.92■■■□□ 2.54
CLTCL1P53675 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CLTCL1P53675 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CLTCL1P53675 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CLTCL1P53675 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC30.91■■■□□ 2.54
CLTCL1P53675 SLC7A5P1-201ENST00000568957 537 ntBASIC30.91■■■□□ 2.54
CLTCL1P53675 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC30.91■■■□□ 2.54
CLTCL1P53675 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC30.91■■■□□ 2.54
CLTCL1P53675 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC30.91■■■□□ 2.54
CLTCL1P53675 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
CLTCL1P53675 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
CLTCL1P53675 FGF8-207ENST00000618991 856 ntTSL 3 BASIC30.91■■■□□ 2.54
CLTCL1P53675 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
CLTCL1P53675 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CLTCL1P53675 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC30.9■■■□□ 2.54
CLTCL1P53675 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC30.9■■■□□ 2.54
CLTCL1P53675 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC30.9■■■□□ 2.54
CLTCL1P53675 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
CLTCL1P53675 COMT-203ENST00000403184 2217 ntTSL 2 BASIC30.9■■■□□ 2.54
CLTCL1P53675 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CLTCL1P53675 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC30.9■■■□□ 2.54
CLTCL1P53675 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CLTCL1P53675 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC30.89■■■□□ 2.54
CLTCL1P53675 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.54
CLTCL1P53675 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CLTCL1P53675 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC30.89■■■□□ 2.54
CLTCL1P53675 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC30.89■■■□□ 2.54
CLTCL1P53675 PHB2-213ENST00000546111 858 ntTSL 2 BASIC30.89■■■□□ 2.54
CLTCL1P53675 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CLTCL1P53675 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CLTCL1P53675 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CLTCL1P53675 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CLTCL1P53675 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CLTCL1P53675 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CLTCL1P53675 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CLTCL1P53675 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CLTCL1P53675 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CLTCL1P53675 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC30.88■■■□□ 2.53
CLTCL1P53675 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
CLTCL1P53675 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC30.88■■■□□ 2.53
CLTCL1P53675 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
CLTCL1P53675 AC105036.2-201ENST00000569468 176 ntBASIC30.88■■■□□ 2.53
CLTCL1P53675 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CLTCL1P53675 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CLTCL1P53675 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
CLTCL1P53675 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC30.88■■■□□ 2.53
CLTCL1P53675 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
CLTCL1P53675 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CLTCL1P53675 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CLTCL1P53675 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC30.87■■■□□ 2.53
CLTCL1P53675 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC30.87■■■□□ 2.53
CLTCL1P53675 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC30.87■■■□□ 2.53
CLTCL1P53675 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
CLTCL1P53675 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CLTCL1P53675 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC30.87■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms