Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 YDR222WYDR222W 1248 nt2.84□□□□□ -1.95
SSU72P53538 TLG1YDR468C 675 nt2.84□□□□□ -1.95
SSU72P53538 YGR149WYGR149W 1299 nt2.84□□□□□ -1.95
SSU72P53538 MRPL6YHR147C 645 nt2.84□□□□□ -1.95
SSU72P53538 YIR018C-AYIR018C-A 138 nt2.84□□□□□ -1.95
SSU72P53538 MRPL49YJL096W 486 nt2.84□□□□□ -1.95
SSU72P53538 GLG2YJL137C 1143 nt2.84□□□□□ -1.95
SSU72P53538 YMR075C-AYMR075C-A 366 nt2.84□□□□□ -1.95
SSU72P53538 BMT2YBR141C 1014 nt2.84□□□□□ -1.95
SSU72P53538 PDC2YDR081C 2778 nt2.84□□□□□ -1.95
SSU72P53538 CSR2YPR030W 3366 nt2.84□□□□□ -1.96
SSU72P53538 YMR317WYMR317W 3423 nt2.84□□□□□ -1.96
SSU72P53538 REG1YDR028C 3045 nt2.84□□□□□ -1.96
SSU72P53538 NDT80YHR124W 1884 nt2.84□□□□□ -1.96
SSU72P53538 RAD2YGR258C 3096 nt2.83□□□□□ -1.96
SSU72P53538 PSF1YDR013W 627 nt2.83□□□□□ -1.96
SSU72P53538 YGR161W-CYGR161W-C 279 nt2.83□□□□□ -1.96
SSU72P53538 MRPS35YGR165W 1038 nt2.83□□□□□ -1.96
SSU72P53538 REC102YLR329W 795 nt2.83□□□□□ -1.96
SSU72P53538 MCM1YMR043W 861 nt2.83□□□□□ -1.96
SSU72P53538 PRP8YHR165C 7242 nt2.83□□□□□ -1.96
SSU72P53538 YIG1YPL201C 1386 nt2.83□□□□□ -1.96
SSU72P53538 SSM4YIL030C 3960 nt2.83□□□□□ -1.96
SSU72P53538 PTM1YKL039W 1572 nt2.83□□□□□ -1.96
SSU72P53538 ITC1YGL133W 3795 nt2.82□□□□□ -1.96
SSU72P53538 YAT2YER024W 2772 nt2.82□□□□□ -1.96
SSU72P53538 SPT2YER161C 1002 nt2.82□□□□□ -1.96
SSU72P53538 YKR011CYKR011C 1062 nt2.82□□□□□ -1.96
SSU72P53538 AAR2YBL074C 1068 nt2.82□□□□□ -1.96
SSU72P53538 YBL094CYBL094C 333 nt2.82□□□□□ -1.96
SSU72P53538 GPI2YPL076W 843 nt2.82□□□□□ -1.96
SSU72P53538 YPR053CYPR053C 456 nt2.82□□□□□ -1.96
SSU72P53538 PHO88YBR106W 567 nt2.82□□□□□ -1.96
SSU72P53538 CIN1YOR349W 3045 nt2.82□□□□□ -1.96
SSU72P53538 AGA1YNR044W 2178 nt2.82□□□□□ -1.96
SSU72P53538 MRH4YGL064C 1686 nt2.82□□□□□ -1.96
SSU72P53538 MSH2YOL090W 2895 nt2.81□□□□□ -1.96
SSU72P53538 VPS3YDR495C 3036 nt2.81□□□□□ -1.96
SSU72P53538 GPI13YLL031C 3054 nt2.81□□□□□ -1.96
SSU72P53538 YDR161WYDR161W 1164 nt2.81□□□□□ -1.96
SSU72P53538 OTU1YFL044C 906 nt2.81□□□□□ -1.96
SSU72P53538 YGL082WYGL082W 1146 nt2.81□□□□□ -1.96
SSU72P53538 POP6YGR030C 477 nt2.81□□□□□ -1.96
SSU72P53538 RPC37YKR025W 849 nt2.81□□□□□ -1.96
SSU72P53538 RIB4YOL143C 510 nt2.81□□□□□ -1.96
SSU72P53538 PLP2YOR281C 861 nt2.81□□□□□ -1.96
SSU72P53538 YOR342CYOR342C 960 nt2.81□□□□□ -1.96
SSU72P53538 YPR203WYPR203W 309 nt2.81□□□□□ -1.96
SSU72P53538 YPR148CYPR148C 1308 nt2.81□□□□□ -1.96
SSU72P53538 YFL040WYFL040W 1623 nt2.81□□□□□ -1.96
SSU72P53538 HRD1YOL013C 1656 nt2.81□□□□□ -1.96
SSU72P53538 MIT1YEL007W 2001 nt2.81□□□□□ -1.96
SSU72P53538 MEF1YLR069C 2286 nt2.81□□□□□ -1.96
SSU72P53538 BUD4YJR092W 4344 nt2.81□□□□□ -1.96
SSU72P53538 RPA135YPR010C 3612 nt2.8□□□□□ -1.96
SSU72P53538 VPS33YLR396C 2076 nt2.8□□□□□ -1.96
SSU72P53538 TPD3YAL016W 1908 nt2.8□□□□□ -1.96
SSU72P53538 CIK1YMR198W 1785 nt2.8□□□□□ -1.96
SSU72P53538 SWC4YGR002C 1431 nt2.8□□□□□ -1.96
SSU72P53538 TAF2YCR042C 4224 nt2.8□□□□□ -1.96
SSU72P53538 YCR007CYCR007C 720 nt2.8□□□□□ -1.96
SSU72P53538 ADH4YGL256W 1149 nt2.8□□□□□ -1.96
SSU72P53538 TAM41YGR046W 1158 nt2.8□□□□□ -1.96
SSU72P53538 SGN1YIR001C 753 nt2.8□□□□□ -1.96
SSU72P53538 RPL17AYKL180W 555 nt2.8□□□□□ -1.96
SSU72P53538 YLR363W-AYLR363W-A 258 nt2.8□□□□□ -1.96
SSU72P53538 YNL144W-AYNL144W-A 84 nt2.8□□□□□ -1.96
SSU72P53538 PNT1YOR266W 1272 nt2.8□□□□□ -1.96
SSU72P53538 YOR314WYOR314W 330 nt2.8□□□□□ -1.96
SSU72P53538 YPR027CYPR027C 834 nt2.8□□□□□ -1.96
SSU72P53538 CHS3YBR023C 3498 nt2.8□□□□□ -1.96
SSU72P53538 SIZ1YDR409W 2715 nt2.8□□□□□ -1.96
SSU72P53538 ARG5,6YER069W 2592 nt2.8□□□□□ -1.96
SSU72P53538 MSA1YOR066W 1890 nt2.79□□□□□ -1.96
SSU72P53538 YDR290WYDR290W 330 nt2.79□□□□□ -1.96
SSU72P53538 GPP2YER062C 753 nt2.79□□□□□ -1.96
SSU72P53538 IRC18YJL037W 675 nt2.79□□□□□ -1.96
SSU72P53538 YJL175WYJL175W 513 nt2.79□□□□□ -1.96
SSU72P53538 TFA2YKR062W 987 nt2.79□□□□□ -1.96
SSU72P53538 NDL1YLR254C 570 nt2.79□□□□□ -1.96
SSU72P53538 YLR412C-AYLR412C-A 207 nt2.79□□□□□ -1.96
SSU72P53538 RSF1YMR030W 1131 nt2.79□□□□□ -1.96
SSU72P53538 YOR082CYOR082C 342 nt2.79□□□□□ -1.96
SSU72P53538 IAH1YOR126C 717 nt2.79□□□□□ -1.96
SSU72P53538 CLN2YPL256C 1638 nt2.79□□□□□ -1.96
SSU72P53538 CTK1YKL139W 1587 nt2.78□□□□□ -1.96
SSU72P53538 YHR080CYHR080C 4038 nt2.78□□□□□ -1.96
SSU72P53538 MGR3YMR115W 1506 nt2.78□□□□□ -1.96
SSU72P53538 JSN1YJR091C 3276 nt2.78□□□□□ -1.96
SSU72P53538 STU2YLR045C 2667 nt2.78□□□□□ -1.96
SSU72P53538 NIT3YLR351C 876 nt2.78□□□□□ -1.96
SSU72P53538 RPL20AYMR242C 519 nt2.78□□□□□ -1.96
SSU72P53538 YMR306C-AYMR306C-A 390 nt2.78□□□□□ -1.96
SSU72P53538 GIS2YNL255C 462 nt2.78□□□□□ -1.96
SSU72P53538 EXO84YBR102C 2262 nt2.78□□□□□ -1.96
SSU72P53538 NUP60YAR002W 1620 nt2.78□□□□□ -1.96
SSU72P53538 SIN4YNL236W 2925 nt2.78□□□□□ -1.96
SSU72P53538 SLH1YGR271W 5904 nt2.77□□□□□ -1.97
SSU72P53538 ERP3YDL018C 678 nt2.77□□□□□ -1.97
SSU72P53538 DID4YKL002W 699 nt2.77□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 17.9 ms