Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 KRT17P3-201ENST00000420566 1262 ntBASIC21.54■■□□□ 1.04
NUBP1P53384 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NUBP1P53384 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.54■■□□□ 1.04
NUBP1P53384 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.54■■□□□ 1.04
NUBP1P53384 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NUBP1P53384 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.54■■□□□ 1.04
NUBP1P53384 AC006213.4-201ENST00000616184 634 ntBASIC21.54■■□□□ 1.04
NUBP1P53384 AC120498.10-201ENST00000621827 505 ntBASIC21.54■■□□□ 1.04
NUBP1P53384 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUBP1P53384 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUBP1P53384 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.53■■□□□ 1.04
NUBP1P53384 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NUBP1P53384 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
NUBP1P53384 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NUBP1P53384 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.53■■□□□ 1.04
NUBP1P53384 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.53■■□□□ 1.04
NUBP1P53384 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
NUBP1P53384 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.53■■□□□ 1.04
NUBP1P53384 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.53■■□□□ 1.04
NUBP1P53384 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.53■■□□□ 1.04
NUBP1P53384 EEF1DP3-203ENST00000566025 782 ntBASIC21.53■■□□□ 1.04
NUBP1P53384 RN7SL471P-201ENST00000580476 299 ntBASIC21.53■■□□□ 1.04
NUBP1P53384 AC060766.5-201ENST00000590539 871 ntBASIC21.53■■□□□ 1.04
NUBP1P53384 AC053503.5-201ENST00000601508 636 ntBASIC21.53■■□□□ 1.04
NUBP1P53384 AL591742.1-201ENST00000604433 565 ntBASIC21.53■■□□□ 1.04
NUBP1P53384 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.53■■□□□ 1.04
NUBP1P53384 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NUBP1P53384 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUBP1P53384 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUBP1P53384 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.53■■□□□ 1.04
NUBP1P53384 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NUBP1P53384 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.52■■□□□ 1.04
NUBP1P53384 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.52■■□□□ 1.04
NUBP1P53384 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.52■■□□□ 1.04
NUBP1P53384 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.52■■□□□ 1.04
NUBP1P53384 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.52■■□□□ 1.04
NUBP1P53384 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NUBP1P53384 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
NUBP1P53384 HLA-B-256ENST00000639848 1089 ntBASIC21.52■■□□□ 1.04
NUBP1P53384 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NUBP1P53384 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUBP1P53384 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUBP1P53384 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUBP1P53384 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
NUBP1P53384 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NUBP1P53384 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.51■■□□□ 1.03
NUBP1P53384 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUBP1P53384 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUBP1P53384 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NUBP1P53384 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.5■■□□□ 1.03
NUBP1P53384 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUBP1P53384 LSM12P1-201ENST00000411836 588 ntBASIC21.5■■□□□ 1.03
NUBP1P53384 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUBP1P53384 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.5■■□□□ 1.03
NUBP1P53384 AC012618.2-201ENST00000428058 849 ntBASIC21.5■■□□□ 1.03
NUBP1P53384 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.5■■□□□ 1.03
NUBP1P53384 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.5■■□□□ 1.03
NUBP1P53384 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.5■■□□□ 1.03
NUBP1P53384 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
NUBP1P53384 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.5■■□□□ 1.03
NUBP1P53384 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.5■■□□□ 1.03
NUBP1P53384 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUBP1P53384 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
NUBP1P53384 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUBP1P53384 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUBP1P53384 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NUBP1P53384 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NUBP1P53384 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUBP1P53384 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUBP1P53384 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUBP1P53384 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.49■■□□□ 1.03
NUBP1P53384 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUBP1P53384 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
NUBP1P53384 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUBP1P53384 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
NUBP1P53384 AC135731.1-201ENST00000569415 2548 ntBASIC21.49■■□□□ 1.03
NUBP1P53384 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.48■■□□□ 1.03
NUBP1P53384 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NUBP1P53384 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.48■■□□□ 1.03
NUBP1P53384 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUBP1P53384 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUBP1P53384 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUBP1P53384 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUBP1P53384 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUBP1P53384 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.48■■□□□ 1.03
NUBP1P53384 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC21.48■■□□□ 1.03
NUBP1P53384 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC21.48■■□□□ 1.03
NUBP1P53384 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.48■■□□□ 1.03
NUBP1P53384 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
NUBP1P53384 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUBP1P53384 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUBP1P53384 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NUBP1P53384 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUBP1P53384 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.47■■□□□ 1.03
NUBP1P53384 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUBP1P53384 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NUBP1P53384 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.47■■□□□ 1.03
NUBP1P53384 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.47■■□□□ 1.03
NUBP1P53384 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
NUBP1P53384 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms