Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.93■□□□□ 0.94
GTF2A1P52655 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GTF2A1P52655 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GTF2A1P52655 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.93■□□□□ 0.94
GTF2A1P52655 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
GTF2A1P52655 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
GTF2A1P52655 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GTF2A1P52655 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GTF2A1P52655 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.93■□□□□ 0.94
GTF2A1P52655 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GTF2A1P52655 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GTF2A1P52655 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.93■□□□□ 0.94
GTF2A1P52655 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GTF2A1P52655 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.93■□□□□ 0.94
GTF2A1P52655 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GTF2A1P52655 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
GTF2A1P52655 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2A1P52655 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2A1P52655 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2A1P52655 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2A1P52655 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2A1P52655 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.92■□□□□ 0.94
GTF2A1P52655 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2A1P52655 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2A1P52655 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2A1P52655 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
GTF2A1P52655 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.92■□□□□ 0.94
GTF2A1P52655 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2A1P52655 AC005332.8-201ENST00000622750 2735 ntBASIC20.92■□□□□ 0.94
GTF2A1P52655 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.92■□□□□ 0.94
GTF2A1P52655 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2A1P52655 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2A1P52655 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.92■□□□□ 0.94
GTF2A1P52655 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
GTF2A1P52655 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2A1P52655 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.92■□□□□ 0.94
GTF2A1P52655 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
GTF2A1P52655 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
GTF2A1P52655 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2A1P52655 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2A1P52655 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2A1P52655 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.91■□□□□ 0.94
GTF2A1P52655 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GTF2A1P52655 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GTF2A1P52655 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GTF2A1P52655 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GTF2A1P52655 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GTF2A1P52655 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.91■□□□□ 0.94
GTF2A1P52655 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
GTF2A1P52655 NEFHP1-201ENST00000412845 2629 ntBASIC20.91■□□□□ 0.94
GTF2A1P52655 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
GTF2A1P52655 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.91■□□□□ 0.94
GTF2A1P52655 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.91■□□□□ 0.94
GTF2A1P52655 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GTF2A1P52655 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
GTF2A1P52655 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.91■□□□□ 0.94
GTF2A1P52655 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.91■□□□□ 0.94
GTF2A1P52655 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
GTF2A1P52655 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GTF2A1P52655 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
GTF2A1P52655 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GTF2A1P52655 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GTF2A1P52655 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.91■□□□□ 0.94
GTF2A1P52655 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2A1P52655 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
GTF2A1P52655 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2A1P52655 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2A1P52655 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2A1P52655 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2A1P52655 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
GTF2A1P52655 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2A1P52655 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2A1P52655 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.9■□□□□ 0.94
GTF2A1P52655 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.9■□□□□ 0.94
GTF2A1P52655 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
GTF2A1P52655 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2A1P52655 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2A1P52655 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.9■□□□□ 0.94
GTF2A1P52655 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
GTF2A1P52655 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.89■□□□□ 0.94
GTF2A1P52655 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
GTF2A1P52655 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GTF2A1P52655 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GTF2A1P52655 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.89■□□□□ 0.93
GTF2A1P52655 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GTF2A1P52655 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
GTF2A1P52655 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.89■□□□□ 0.93
GTF2A1P52655 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.89■□□□□ 0.93
GTF2A1P52655 AC020916.1-201ENST00000587762 1774 ntBASIC20.89■□□□□ 0.93
GTF2A1P52655 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GTF2A1P52655 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
GTF2A1P52655 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
GTF2A1P52655 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GTF2A1P52655 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.88■□□□□ 0.93
GTF2A1P52655 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.88■□□□□ 0.93
GTF2A1P52655 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2A1P52655 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2A1P52655 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2A1P52655 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2A1P52655 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms