Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC1P51610 RNA5SP413-201ENST00000516373 109 ntBASIC18.76■□□□□ 0.59
HCFC1P51610 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.76■□□□□ 0.59
HCFC1P51610 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC1P51610 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.76■□□□□ 0.59
HCFC1P51610 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC1P51610 ITM2C-210ENST00000620962 501 ntBASIC18.76■□□□□ 0.59
HCFC1P51610 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC1P51610 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC1P51610 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.76■□□□□ 0.59
HCFC1P51610 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.76■□□□□ 0.59
HCFC1P51610 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC1P51610 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HCFC1P51610 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC1P51610 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC1P51610 AC105036.2-201ENST00000569468 176 ntBASIC18.75■□□□□ 0.59
HCFC1P51610 AC008687.6-201ENST00000596318 630 ntBASIC18.75■□□□□ 0.59
HCFC1P51610 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
HCFC1P51610 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.75■□□□□ 0.59
HCFC1P51610 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.75■□□□□ 0.59
HCFC1P51610 AC133041.1-202ENST00000642053 222 ntBASIC18.75■□□□□ 0.59
HCFC1P51610 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC1P51610 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC1P51610 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC1P51610 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC1P51610 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC1P51610 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HCFC1P51610 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
HCFC1P51610 POU5F1P3-201ENST00000428824 1078 ntBASIC18.74■□□□□ 0.59
HCFC1P51610 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.74■□□□□ 0.59
HCFC1P51610 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.74■□□□□ 0.59
HCFC1P51610 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.74■□□□□ 0.59
HCFC1P51610 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.74■□□□□ 0.59
HCFC1P51610 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.74■□□□□ 0.59
HCFC1P51610 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HCFC1P51610 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.74■□□□□ 0.59
HCFC1P51610 AC092068.2-201ENST00000590491 1708 ntBASIC18.74■□□□□ 0.59
HCFC1P51610 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HCFC1P51610 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
HCFC1P51610 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HCFC1P51610 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HCFC1P51610 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.74■□□□□ 0.59
HCFC1P51610 AC079089.2-201ENST00000531211 1277 ntBASIC18.74■□□□□ 0.59
HCFC1P51610 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.74■□□□□ 0.59
HCFC1P51610 EEF1DP3-203ENST00000566025 782 ntBASIC18.74■□□□□ 0.59
HCFC1P51610 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HCFC1P51610 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
HCFC1P51610 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HCFC1P51610 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HCFC1P51610 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.73■□□□□ 0.59
HCFC1P51610 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC1P51610 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.73■□□□□ 0.59
HCFC1P51610 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC1P51610 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
HCFC1P51610 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.73■□□□□ 0.59
HCFC1P51610 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.73■□□□□ 0.59
HCFC1P51610 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.73■□□□□ 0.59
HCFC1P51610 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC1P51610 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC1P51610 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC1P51610 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HCFC1P51610 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC1P51610 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC1P51610 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.73■□□□□ 0.59
HCFC1P51610 AC007322.4-201ENST00000509611 723 ntBASIC18.73■□□□□ 0.59
HCFC1P51610 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HCFC1P51610 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HCFC1P51610 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HCFC1P51610 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.72■□□□□ 0.59
HCFC1P51610 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HCFC1P51610 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HCFC1P51610 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HCFC1P51610 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.72■□□□□ 0.59
HCFC1P51610 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HCFC1P51610 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.72■□□□□ 0.59
HCFC1P51610 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HCFC1P51610 FAM201B-201ENST00000458407 597 ntBASIC18.72■□□□□ 0.59
HCFC1P51610 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.72■□□□□ 0.59
HCFC1P51610 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HCFC1P51610 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HCFC1P51610 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC1P51610 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC1P51610 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HCFC1P51610 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC1P51610 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.71■□□□□ 0.59
HCFC1P51610 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
HCFC1P51610 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC1P51610 AC083880.1-201ENST00000608266 535 ntBASIC18.71■□□□□ 0.59
HCFC1P51610 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HCFC1P51610 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC1P51610 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HCFC1P51610 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC1P51610 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC1P51610 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HCFC1P51610 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.71■□□□□ 0.59
HCFC1P51610 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC1P51610 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC1P51610 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HCFC1P51610 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HCFC1P51610 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms