Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 ABD1YBR236C 1311 nt2.17□□□□□ -2.06
VPS55P47111 YLR278CYLR278C 4026 nt2.17□□□□□ -2.06
VPS55P47111 BNR1YIL159W 4128 nt2.17□□□□□ -2.06
VPS55P47111 RAD55YDR076W 1221 nt2.17□□□□□ -2.06
VPS55P47111 PEX10YDR265W 1014 nt2.17□□□□□ -2.06
VPS55P47111 LIF1YGL090W 1266 nt2.17□□□□□ -2.06
VPS55P47111 OKP1YGR179C 1221 nt2.17□□□□□ -2.06
VPS55P47111 PRE8YML092C 753 nt2.17□□□□□ -2.06
VPS55P47111 RPL13BYMR142C 600 nt2.17□□□□□ -2.06
VPS55P47111 PPA2YMR267W 933 nt2.17□□□□□ -2.06
VPS55P47111 OCA2YNL056W 594 nt2.17□□□□□ -2.06
VPS55P47111 AIM39YOL053W 1188 nt2.17□□□□□ -2.06
VPS55P47111 NME1NME1 340 nt2.17□□□□□ -2.06
VPS55P47111 YOR385WYOR385W 873 nt2.17□□□□□ -2.06
VPS55P47111 LCL1YPL056C 306 nt2.17□□□□□ -2.06
VPS55P47111 NSA1YGL111W 1392 nt2.17□□□□□ -2.06
VPS55P47111 SRB8YCR081W 4284 nt2.17□□□□□ -2.06
VPS55P47111 ALG11YNL048W 1647 nt2.17□□□□□ -2.06
VPS55P47111 LCB4YOR171C 1875 nt2.16□□□□□ -2.06
VPS55P47111 YHR078WYHR078W 1659 nt2.16□□□□□ -2.06
VPS55P47111 UBP12YJL197W 3765 nt2.16□□□□□ -2.06
VPS55P47111 JSN1YJR091C 3276 nt2.16□□□□□ -2.06
VPS55P47111 BCS1YDR375C 1371 nt2.16□□□□□ -2.06
VPS55P47111 ALG1YBR110W 1350 nt2.16□□□□□ -2.06
VPS55P47111 NHP10YDL002C 612 nt2.16□□□□□ -2.06
VPS55P47111 YDR209CYDR209C 414 nt2.16□□□□□ -2.06
VPS55P47111 YHB1YGR234W 1200 nt2.16□□□□□ -2.06
VPS55P47111 YAL031W-AYAL031W-A 309 nt2.16□□□□□ -2.06
VPS55P47111 NMA111YNL123W 2994 nt2.16□□□□□ -2.06
VPS55P47111 YPR203WYPR203W 309 nt2.16□□□□□ -2.06
VPS55P47111 MIH1YMR036C 1665 nt2.15□□□□□ -2.06
VPS55P47111 EMP70YLR083C 2004 nt2.15□□□□□ -2.06
VPS55P47111 PGS1YCL004W 1566 nt2.15□□□□□ -2.06
VPS55P47111 ADY4YLR227C 1482 nt2.15□□□□□ -2.06
VPS55P47111 VPS64YDR200C 1815 nt2.15□□□□□ -2.06
VPS55P47111 MOB2YFL034C-B 864 nt2.15□□□□□ -2.07
VPS55P47111 YGR018CYGR018C 330 nt2.15□□□□□ -2.07
VPS55P47111 PCD1YLR151C 1023 nt2.15□□□□□ -2.07
VPS55P47111 YLR339CYLR339C 552 nt2.15□□□□□ -2.07
VPS55P47111 MAD3YJL013C 1548 nt2.15□□□□□ -2.07
VPS55P47111 RKM3YBR030W 1659 nt2.15□□□□□ -2.07
VPS55P47111 CDC55YGL190C 1581 nt2.15□□□□□ -2.07
VPS55P47111 RIM1YCR028C-A 408 nt2.14□□□□□ -2.07
VPS55P47111 RRT13YER066W 558 nt2.14□□□□□ -2.07
VPS55P47111 COS12YGL263W 1143 nt2.14□□□□□ -2.07
VPS55P47111 DOG1YHR044C 741 nt2.14□□□□□ -2.07
VPS55P47111 YOR186WYOR186W 435 nt2.14□□□□□ -2.07
VPS55P47111 TMA16YOR252W 537 nt2.14□□□□□ -2.07
VPS55P47111 TOP1YOL006C 2310 nt2.14□□□□□ -2.07
VPS55P47111 SKT5YBL061C 2091 nt2.14□□□□□ -2.07
VPS55P47111 MSB2YGR014W 3921 nt2.14□□□□□ -2.07
VPS55P47111 KRE2YDR483W 1329 nt2.14□□□□□ -2.07
VPS55P47111 NEM1YHR004C 1341 nt2.14□□□□□ -2.07
VPS55P47111 VAS1YGR094W 3315 nt2.14□□□□□ -2.07
VPS55P47111 YGR067CYGR067C 2415 nt2.13□□□□□ -2.07
VPS55P47111 ISW2YOR304W 3363 nt2.13□□□□□ -2.07
VPS55P47111 SPS2YDR522C 1509 nt2.13□□□□□ -2.07
VPS55P47111 YPR1YDR368W 939 nt2.13□□□□□ -2.07
VPS55P47111 PSR1YLL010C 1284 nt2.13□□□□□ -2.07
VPS55P47111 TIS11YLR136C 858 nt2.13□□□□□ -2.07
VPS55P47111 HTA2YBL003C 399 nt2.13□□□□□ -2.07
VPS55P47111 GLO1YML004C 981 nt2.13□□□□□ -2.07
VPS55P47111 RCE1YMR274C 948 nt2.13□□□□□ -2.07
VPS55P47111 YOL079WYOL079W 399 nt2.13□□□□□ -2.07
VPS55P47111 ATG29YPL166W 642 nt2.13□□□□□ -2.07
VPS55P47111 PBP2YBR233W 1242 nt2.13□□□□□ -2.07
VPS55P47111 YPL150WYPL150W 2706 nt2.12□□□□□ -2.07
VPS55P47111 ESC1YMR219W 4977 nt2.12□□□□□ -2.07
VPS55P47111 SYS1YJL004C 612 nt2.12□□□□□ -2.07
VPS55P47111 YLR326WYLR326W 723 nt2.12□□□□□ -2.07
VPS55P47111 JIP3YLR331C 378 nt2.12□□□□□ -2.07
VPS55P47111 SLP1YOR154W 1764 nt2.12□□□□□ -2.07
VPS55P47111 BCK1YJL095W 4437 nt2.12□□□□□ -2.07
VPS55P47111 UTP25YIL091C 2166 nt2.12□□□□□ -2.07
VPS55P47111 PUF2YPR042C 3228 nt2.12□□□□□ -2.07
VPS55P47111 PFF1YBR074W 2931 nt2.11□□□□□ -2.07
VPS55P47111 IMH1YLR309C 2736 nt2.11□□□□□ -2.07
VPS55P47111 snR70snR70 164 nt2.11□□□□□ -2.07
VPS55P47111 YAL065CYAL065C 387 nt2.11□□□□□ -2.07
VPS55P47111 YPL276WYPL276W 438 nt2.11□□□□□ -2.07
VPS55P47111 CHS3YBR023C 3498 nt2.11□□□□□ -2.07
VPS55P47111 MIG1YGL035C 1515 nt2.11□□□□□ -2.07
VPS55P47111 FKS3YMR306W 5358 nt2.11□□□□□ -2.07
VPS55P47111 HBT1YDL223C 3141 nt2.11□□□□□ -2.07
VPS55P47111 DNA2YHR164C 4569 nt2.1□□□□□ -2.07
VPS55P47111 RMT2YDR465C 1239 nt2.1□□□□□ -2.07
VPS55P47111 TDA8YAL064C-A 381 nt2.1□□□□□ -2.07
VPS55P47111 ERP1YAR002C-A 660 nt2.1□□□□□ -2.07
VPS55P47111 COQ9YLR201C 783 nt2.1□□□□□ -2.07
VPS55P47111 YOL035CYOL035C 303 nt2.1□□□□□ -2.07
VPS55P47111 VPS27YNR006W 1869 nt2.09□□□□□ -2.07
VPS55P47111 KEL2YGR238C 2649 nt2.09□□□□□ -2.07
VPS55P47111 RPO41YFL036W 4056 nt2.09□□□□□ -2.07
VPS55P47111 FRQ1YDR373W 573 nt2.09□□□□□ -2.07
VPS55P47111 tW(CCA)G1tW(CCA)G1 72 nt2.09□□□□□ -2.07
VPS55P47111 tW(CCA)G2tW(CCA)G2 72 nt2.09□□□□□ -2.07
VPS55P47111 tW(CCA)JtW(CCA)J 72 nt2.09□□□□□ -2.07
VPS55P47111 tW(CCA)KtW(CCA)K 72 nt2.09□□□□□ -2.07
VPS55P47111 tW(CCA)MtW(CCA)M 72 nt2.09□□□□□ -2.07
VPS55P47111 tW(CCA)PtW(CCA)P 72 nt2.09□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms