Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
NR4A2P43354 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR4A2P43354 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR4A2P43354 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.26■□□□□ 0.67
NR4A2P43354 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NR4A2P43354 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR4A2P43354 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.26■□□□□ 0.67
NR4A2P43354 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.26■□□□□ 0.67
NR4A2P43354 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
NR4A2P43354 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.26■□□□□ 0.67
NR4A2P43354 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NR4A2P43354 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.26■□□□□ 0.67
NR4A2P43354 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.26■□□□□ 0.67
NR4A2P43354 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR4A2P43354 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NR4A2P43354 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR4A2P43354 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.26■□□□□ 0.67
NR4A2P43354 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR4A2P43354 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR4A2P43354 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NR4A2P43354 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR4A2P43354 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A2P43354 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A2P43354 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A2P43354 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A2P43354 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A2P43354 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A2P43354 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A2P43354 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A2P43354 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.25■□□□□ 0.67
NR4A2P43354 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A2P43354 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.25■□□□□ 0.67
NR4A2P43354 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A2P43354 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.25■□□□□ 0.67
NR4A2P43354 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.25■□□□□ 0.67
NR4A2P43354 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A2P43354 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A2P43354 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
NR4A2P43354 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.25■□□□□ 0.67
NR4A2P43354 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A2P43354 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR4A2P43354 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NR4A2P43354 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR4A2P43354 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NR4A2P43354 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.24■□□□□ 0.67
NR4A2P43354 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.24■□□□□ 0.67
NR4A2P43354 AC024257.2-201ENST00000549699 147 ntBASIC19.24■□□□□ 0.67
NR4A2P43354 DUX4L19-201ENST00000557448 1267 ntBASIC19.24■□□□□ 0.67
NR4A2P43354 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.24■□□□□ 0.67
NR4A2P43354 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR4A2P43354 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NR4A2P43354 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR4A2P43354 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NR4A2P43354 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR4A2P43354 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
NR4A2P43354 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR4A2P43354 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.24■□□□□ 0.67
NR4A2P43354 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR4A2P43354 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.24■□□□□ 0.67
NR4A2P43354 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A2P43354 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A2P43354 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A2P43354 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A2P43354 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.23■□□□□ 0.67
NR4A2P43354 EDA-201ENST00000338901 1233 ntBASIC19.23■□□□□ 0.67
NR4A2P43354 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
NR4A2P43354 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A2P43354 SUDS3P1-201ENST00000505831 966 ntBASIC19.23■□□□□ 0.67
NR4A2P43354 AL031432.3-201ENST00000607698 485 ntBASIC19.23■□□□□ 0.67
NR4A2P43354 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
NR4A2P43354 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.23■□□□□ 0.67
NR4A2P43354 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A2P43354 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A2P43354 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
NR4A2P43354 AC079630.1-202ENST00000618127 1840 ntBASIC19.23■□□□□ 0.67
NR4A2P43354 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A2P43354 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR4A2P43354 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.23■□□□□ 0.67
NR4A2P43354 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A2P43354 AC131274.2-201ENST00000580697 1507 ntBASIC19.22■□□□□ 0.67
NR4A2P43354 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A2P43354 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A2P43354 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A2P43354 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A2P43354 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A2P43354 ZNRF2P3-201ENST00000424200 374 ntBASIC19.22■□□□□ 0.67
NR4A2P43354 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.22■□□□□ 0.67
NR4A2P43354 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A2P43354 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A2P43354 AL355001.2-201ENST00000620617 1191 ntBASIC19.22■□□□□ 0.67
NR4A2P43354 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NR4A2P43354 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A2P43354 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.22■□□□□ 0.67
NR4A2P43354 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A2P43354 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A2P43354 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR4A2P43354 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.22■□□□□ 0.67
NR4A2P43354 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR4A2P43354 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.21■□□□□ 0.67
NR4A2P43354 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms