Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeast

Predictions only

Length 763 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	P42843	TSC13	YDL015C	933 nt		4.1	□□□□□ -1.75
SKP2	P42843	UBC9	YDL064W	474 nt		4.1	□□□□□ -1.75
SKP2	P42843	HTB1	YDR224C	396 nt		4.1	□□□□□ -1.75
SKP2	P42843	FCF1	YDR339C	570 nt		4.1	□□□□□ -1.75
SKP2	P42843	YGL138C	YGL138C	1038 nt		4.1	□□□□□ -1.75
SKP2	P42843	GPI12	YMR281W	915 nt		4.1	□□□□□ -1.75
SKP2	P42843	TOM7	YNL070W	183 nt		4.1	□□□□□ -1.75
SKP2	P42843	YOR238W	YOR238W	912 nt		4.1	□□□□□ -1.75
SKP2	P42843	PIN3	YPR154W	648 nt		4.1	□□□□□ -1.75
SKP2	P42843	SAG1	YJR004C	1953 nt		4.1	□□□□□ -1.75
SKP2	P42843	YLR446W	YLR446W	1302 nt		4.1	□□□□□ -1.75
SKP2	P42843	YLR152C	YLR152C	1731 nt		4.09	□□□□□ -1.75
SKP2	P42843	CYM1	YDR430C	2970 nt		4.09	□□□□□ -1.75
SKP2	P42843	RUB1	YDR139C	234 nt		4.09	□□□□□ -1.75
SKP2	P42843	OST5	YGL226C-A	261 nt		4.09	□□□□□ -1.75
SKP2	P42843	YHI9	YHR029C	885 nt		4.09	□□□□□ -1.75
SKP2	P42843	KIC1	YHR102W	3243 nt		4.09	□□□□□ -1.76
SKP2	P42843	VPS27	YNR006W	1869 nt		4.09	□□□□□ -1.76
SKP2	P42843	CHL1	YPL008W	2586 nt		4.08	□□□□□ -1.76
SKP2	P42843	snR83	snR83	306 nt		4.08	□□□□□ -1.76
SKP2	P42843	RPA14	YDR156W	414 nt		4.08	□□□□□ -1.76
SKP2	P42843	YDR261W-A	YDR261W-A	1317 nt		4.08	□□□□□ -1.76
SKP2	P42843	NHX1	YDR456W	1902 nt		4.08	□□□□□ -1.76
SKP2	P42843	NUG1	YER006W	1563 nt		4.08	□□□□□ -1.76
SKP2	P42843	EMP47	YFL048C	1338 nt		4.08	□□□□□ -1.76
SKP2	P42843	MGA1	YGR249W	1371 nt		4.08	□□□□□ -1.76
SKP2	P42843	FOL2	YGR267C	732 nt		4.08	□□□□□ -1.76
SKP2	P42843	TPD3	YAL016W	1908 nt		4.08	□□□□□ -1.76
SKP2	P42843	YAL034C-B	YAL034C-B	354 nt		4.08	□□□□□ -1.76
SKP2	P42843	PTA1	YAL043C	2358 nt		4.07	□□□□□ -1.76
SKP2	P42843	ATP5	YDR298C	639 nt		4.07	□□□□□ -1.76
SKP2	P42843	VAR1	Q0140	1197 nt		4.07	□□□□□ -1.76
SKP2	P42843	YPT35	YHR105W	645 nt		4.07	□□□□□ -1.76
SKP2	P42843	CTK2	YJL006C	972 nt		4.07	□□□□□ -1.76
SKP2	P42843	DLT1	YMR126C	1029 nt		4.07	□□□□□ -1.76
SKP2	P42843	IST1	YNL265C	897 nt		4.07	□□□□□ -1.76
SKP2	P42843	YOR186W	YOR186W	435 nt		4.07	□□□□□ -1.76
SKP2	P42843	FDH1	YOR388C	1131 nt		4.07	□□□□□ -1.76
SKP2	P42843	SUR1	YPL057C	1149 nt		4.07	□□□□□ -1.76
SKP2	P42843	YPR078C	YPR078C	1119 nt		4.07	□□□□□ -1.76
SKP2	P42843	HPA2	YPR193C	471 nt		4.07	□□□□□ -1.76
SKP2	P42843	VPS53	YJL029C	2469 nt		4.07	□□□□□ -1.76
SKP2	P42843	PEP7	YDR323C	1548 nt		4.06	□□□□□ -1.76
SKP2	P42843	EMC1	YCL045C	2283 nt		4.06	□□□□□ -1.76
SKP2	P42843	YLR108C	YLR108C	1458 nt		4.06	□□□□□ -1.76
SKP2	P42843	IMH1	YLR309C	2736 nt		4.06	□□□□□ -1.76
SKP2	P42843	PRP11	YDL043C	801 nt		4.06	□□□□□ -1.76
SKP2	P42843	Q0142	Q0142	177 nt		4.06	□□□□□ -1.76
SKP2	P42843	TDA10	YGR205W	873 nt		4.06	□□□□□ -1.76
SKP2	P42843	SOL4	YGR248W	768 nt		4.06	□□□□□ -1.76
SKP2	P42843	DAL2	YIR029W	1032 nt		4.06	□□□□□ -1.76
SKP2	P42843	YKL131W	YKL131W	522 nt		4.06	□□□□□ -1.76
SKP2	P42843	ARG80	YMR042W	534 nt		4.06	□□□□□ -1.76
SKP2	P42843	TPT1	YOL102C	693 nt		4.06	□□□□□ -1.76
SKP2	P42843	RIB4	YOL143C	510 nt		4.06	□□□□□ -1.76
SKP2	P42843	IDH2	YOR136W	1110 nt		4.06	□□□□□ -1.76
SKP2	P42843	SAS5	YOR213C	747 nt		4.06	□□□□□ -1.76
SKP2	P42843	GPI13	YLL031C	3054 nt		4.06	□□□□□ -1.76
SKP2	P42843	PEP5	YMR231W	3090 nt		4.06	□□□□□ -1.76
SKP2	P42843	DSN1	YIR010W	1731 nt		4.06	□□□□□ -1.76
SKP2	P42843	UTP5	YDR398W	1932 nt		4.05	□□□□□ -1.76
SKP2	P42843	PRP3	YDR473C	1410 nt		4.05	□□□□□ -1.76
SKP2	P42843	SPT16	YGL207W	3108 nt		4.05	□□□□□ -1.76
SKP2	P42843	WBP1	YEL002C	1293 nt		4.05	□□□□□ -1.76
SKP2	P42843	SVP26	YHR181W	687 nt		4.05	□□□□□ -1.76
SKP2	P42843	MOH1	YBL049W	417 nt		4.05	□□□□□ -1.76
SKP2	P42843	snR11	snR11	258 nt		4.05	□□□□□ -1.76
SKP2	P42843	RAS1	YOR101W	930 nt		4.05	□□□□□ -1.76
SKP2	P42843	RPS10A	YOR293W	318 nt		4.05	□□□□□ -1.76
SKP2	P42843	YOR366W	YOR366W	354 nt		4.05	□□□□□ -1.76
SKP2	P42843	RRP15	YPR143W	753 nt		4.05	□□□□□ -1.76
SKP2	P42843	PBP2	YBR233W	1242 nt		4.05	□□□□□ -1.76
SKP2	P42843	ARP9	YMR033W	1404 nt		4.04	□□□□□ -1.76
SKP2	P42843	STE2	YFL026W	1296 nt		4.04	□□□□□ -1.76
SKP2	P42843	PEF1	YGR058W	1008 nt		4.04	□□□□□ -1.76
SKP2	P42843	YHL034W-A	YHL034W-A	462 nt		4.04	□□□□□ -1.76
SKP2	P42843	RPL19B	YBL027W	570 nt		4.04	□□□□□ -1.76
SKP2	P42843	YNR071C	YNR071C	1029 nt		4.04	□□□□□ -1.76
SKP2	P42843	SIL1	YOL031C	1266 nt		4.04	□□□□□ -1.76
SKP2	P42843	RPL18A	YOL120C	561 nt		4.04	□□□□□ -1.76
SKP2	P42843	APL4	YPR029C	2499 nt		4.04	□□□□□ -1.76
SKP2	P42843	YGL176C	YGL176C	1665 nt		4.03	□□□□□ -1.76
SKP2	P42843	SKG6	YHR149C	2205 nt		4.03	□□□□□ -1.76
SKP2	P42843	NOG1	YPL093W	1944 nt		4.03	□□□□□ -1.76
SKP2	P42843	SDS23	YGL056C	1584 nt		4.03	□□□□□ -1.76
SKP2	P42843	YPK9	YOR291W	4419 nt		4.03	□□□□□ -1.76
SKP2	P42843	FMP10	YER182W	735 nt		4.03	□□□□□ -1.76
SKP2	P42843	RPS25A	YGR027C	327 nt		4.03	□□□□□ -1.76
SKP2	P42843	LST7	YGR057C	729 nt		4.03	□□□□□ -1.76
SKP2	P42843	PET130	YJL023C	1044 nt		4.03	□□□□□ -1.76
SKP2	P42843	SRP40	YKR092C	1221 nt		4.03	□□□□□ -1.76
SKP2	P42843	YNL050C	YNL050C	813 nt		4.03	□□□□□ -1.76
SKP2	P42843	YPL068C	YPL068C	882 nt		4.03	□□□□□ -1.76
SKP2	P42843	PPT2	YPL148C	522 nt		4.03	□□□□□ -1.76
SKP2	P42843	YOR365C	YOR365C	2112 nt		4.03	□□□□□ -1.76
SKP2	P42843	AEP3	YPL005W	1821 nt		4.02	□□□□□ -1.77
SKP2	P42843	RPO21	YDL140C	5202 nt		4.02	□□□□□ -1.77
SKP2	P42843	CTM1	YHR109W	1758 nt		4.02	□□□□□ -1.77
SKP2	P42843	TAF7	YMR227C	1773 nt		4.02	□□□□□ -1.77
SKP2	P42843	GLG2	YJL137C	1143 nt		4.02	□□□□□ -1.77

Retrieved 100 of 7,029 protein–RNA pairs in 25.4 ms