Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KRT20P35900 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.26■□□□□ 0.83
KRT20P35900 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.26■□□□□ 0.83
KRT20P35900 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT20P35900 AC026310.3-201ENST00000625186 2373 ntBASIC20.26■□□□□ 0.83
KRT20P35900 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT20P35900 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
KRT20P35900 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.25■□□□□ 0.83
KRT20P35900 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRT20P35900 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT20P35900 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT20P35900 BX842568.3-201ENST00000418104 571 ntBASIC20.25■□□□□ 0.83
KRT20P35900 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.25■□□□□ 0.83
KRT20P35900 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
KRT20P35900 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT20P35900 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRT20P35900 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
KRT20P35900 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
KRT20P35900 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRT20P35900 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT20P35900 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT20P35900 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT20P35900 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.24■□□□□ 0.83
KRT20P35900 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.24■□□□□ 0.83
KRT20P35900 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT20P35900 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT20P35900 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
KRT20P35900 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT20P35900 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT20P35900 AL355001.2-201ENST00000620617 1191 ntBASIC20.24■□□□□ 0.83
KRT20P35900 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.24■□□□□ 0.83
KRT20P35900 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
KRT20P35900 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
KRT20P35900 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT20P35900 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT20P35900 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
KRT20P35900 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.23■□□□□ 0.83
KRT20P35900 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.23■□□□□ 0.83
KRT20P35900 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT20P35900 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT20P35900 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT20P35900 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
KRT20P35900 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT20P35900 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.23■□□□□ 0.83
KRT20P35900 SLC47A1P1-202ENST00000449666 945 ntBASIC20.23■□□□□ 0.83
KRT20P35900 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT20P35900 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRT20P35900 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
KRT20P35900 AC133561.4-201ENST00000566112 224 ntBASIC20.23■□□□□ 0.83
KRT20P35900 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRT20P35900 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT20P35900 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRT20P35900 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT20P35900 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT20P35900 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT20P35900 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT20P35900 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT20P35900 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT20P35900 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT20P35900 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT20P35900 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
KRT20P35900 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT20P35900 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT20P35900 AC027682.1-201ENST00000562846 899 ntBASIC20.22■□□□□ 0.83
KRT20P35900 AC126544.1-201ENST00000580842 1059 ntBASIC20.22■□□□□ 0.83
KRT20P35900 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.22■□□□□ 0.83
KRT20P35900 AC008764.7-201ENST00000593779 1081 ntBASIC20.22■□□□□ 0.83
KRT20P35900 AC233992.3-201ENST00000607491 485 ntBASIC20.22■□□□□ 0.83
KRT20P35900 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT20P35900 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT20P35900 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT20P35900 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT20P35900 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
KRT20P35900 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT20P35900 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT20P35900 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT20P35900 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT20P35900 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT20P35900 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT20P35900 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.21■□□□□ 0.83
KRT20P35900 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT20P35900 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT20P35900 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT20P35900 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
KRT20P35900 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.21■□□□□ 0.83
KRT20P35900 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.21■□□□□ 0.83
KRT20P35900 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT20P35900 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT20P35900 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT20P35900 AC010525.1-201ENST00000585559 441 ntBASIC20.21■□□□□ 0.83
KRT20P35900 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.21■□□□□ 0.83
KRT20P35900 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT20P35900 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
KRT20P35900 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KRT20P35900 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT20P35900 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
KRT20P35900 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT20P35900 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT20P35900 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.2■□□□□ 0.82
KRT20P35900 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms