Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 XRN1YGL173C 4587 nt2.32□□□□□ -2.04
CDC39P25655 TYR1YBR166C 1359 nt2.31□□□□□ -2.04
CDC39P25655 RPA190YOR341W 4995 nt2.31□□□□□ -2.04
CDC39P25655 DSL1YNL258C 2265 nt2.31□□□□□ -2.04
CDC39P25655 MYO5YMR109W 3660 nt2.31□□□□□ -2.04
CDC39P25655 POL2YNL262W 6669 nt2.31□□□□□ -2.04
CDC39P25655 PUF2YPR042C 3228 nt2.31□□□□□ -2.04
CDC39P25655 MGT1YDL200C 567 nt2.31□□□□□ -2.04
CDC39P25655 DYN2YDR424C 279 nt2.31□□□□□ -2.04
CDC39P25655 STU1YBL034C 4542 nt2.31□□□□□ -2.04
CDC39P25655 TIM21YGR033C 720 nt2.3□□□□□ -2.04
CDC39P25655 YBR116CYBR116C 528 nt2.3□□□□□ -2.04
CDC39P25655 URK1YNR012W 1506 nt2.3□□□□□ -2.04
CDC39P25655 APL4YPR029C 2499 nt2.3□□□□□ -2.04
CDC39P25655 RFM1YOR279C 933 nt2.3□□□□□ -2.04
CDC39P25655 KAR4YCL055W 1008 nt2.3□□□□□ -2.04
CDC39P25655 OAF3YKR064W 2592 nt2.3□□□□□ -2.04
CDC39P25655 MEF1YLR069C 2286 nt2.29□□□□□ -2.04
CDC39P25655 RSM24YDR175C 960 nt2.29□□□□□ -2.04
CDC39P25655 YDR537CYDR537C 606 nt2.29□□□□□ -2.04
CDC39P25655 YER067C-AYER067C-A 324 nt2.29□□□□□ -2.04
CDC39P25655 DSD1YGL196W 1287 nt2.29□□□□□ -2.04
CDC39P25655 YGR291CYGR291C 222 nt2.29□□□□□ -2.04
CDC39P25655 tW(CCA)G1tW(CCA)G1 72 nt2.29□□□□□ -2.04
CDC39P25655 tW(CCA)G2tW(CCA)G2 72 nt2.29□□□□□ -2.04
CDC39P25655 tW(CCA)JtW(CCA)J 72 nt2.29□□□□□ -2.04
CDC39P25655 tW(CCA)KtW(CCA)K 72 nt2.29□□□□□ -2.04
CDC39P25655 tW(CCA)MtW(CCA)M 72 nt2.29□□□□□ -2.04
CDC39P25655 tW(CCA)PtW(CCA)P 72 nt2.29□□□□□ -2.04
CDC39P25655 SFH5YJL145W 885 nt2.29□□□□□ -2.04
CDC39P25655 YPL088WYPL088W 1029 nt2.29□□□□□ -2.04
CDC39P25655 VAC14YLR386W 2643 nt2.29□□□□□ -2.04
CDC39P25655 SLN1YIL147C 3663 nt2.29□□□□□ -2.04
CDC39P25655 YGR237CYGR237C 2358 nt2.29□□□□□ -2.04
CDC39P25655 MPC54YOR177C 1395 nt2.29□□□□□ -2.04
CDC39P25655 CLB3YDL155W 1284 nt2.29□□□□□ -2.04
CDC39P25655 YDR491CYDR491C 492 nt2.29□□□□□ -2.04
CDC39P25655 GLO1YML004C 981 nt2.29□□□□□ -2.04
CDC39P25655 YBR085C-AYBR085C-A 258 nt2.29□□□□□ -2.04
CDC39P25655 YHR078WYHR078W 1659 nt2.28□□□□□ -2.04
CDC39P25655 PGS1YCL004W 1566 nt2.28□□□□□ -2.04
CDC39P25655 VPS27YNR006W 1869 nt2.28□□□□□ -2.04
CDC39P25655 BNS1YGR230W 414 nt2.28□□□□□ -2.04
CDC39P25655 ARD1YHR013C 717 nt2.28□□□□□ -2.04
CDC39P25655 YHR069C-AYHR069C-A 363 nt2.28□□□□□ -2.04
CDC39P25655 YLR365WYLR365W 333 nt2.28□□□□□ -2.04
CDC39P25655 MCM16YPR046W 546 nt2.28□□□□□ -2.04
CDC39P25655 TCM62YBR044C 1719 nt2.28□□□□□ -2.04
CDC39P25655 SAP1YER047C 2694 nt2.28□□□□□ -2.04
CDC39P25655 GYP7YDL234C 2241 nt2.28□□□□□ -2.05
CDC39P25655 FLO1YAR050W 4614 nt2.28□□□□□ -2.05
CDC39P25655 TCP1YDR212W 1680 nt2.27□□□□□ -2.05
CDC39P25655 YAL037WYAL037W 804 nt2.27□□□□□ -2.05
CDC39P25655 SPC42YKL042W 1092 nt2.27□□□□□ -2.05
CDC39P25655 SAM37YMR060C 984 nt2.27□□□□□ -2.05
CDC39P25655 YCL023CYCL023C 348 nt2.27□□□□□ -2.05
CDC39P25655 YJL132WYJL132W 2253 nt2.27□□□□□ -2.05
CDC39P25655 MIC60YKR016W 1623 nt2.27□□□□□ -2.05
CDC39P25655 RPS24AYER074W 408 nt2.27□□□□□ -2.05
CDC39P25655 LST7YGR057C 729 nt2.27□□□□□ -2.05
CDC39P25655 MIC27YNL100W 705 nt2.27□□□□□ -2.05
CDC39P25655 RPS7AYOR096W 573 nt2.27□□□□□ -2.05
CDC39P25655 DOA4YDR069C 2781 nt2.26□□□□□ -2.05
CDC39P25655 DNA2YHR164C 4569 nt2.26□□□□□ -2.05
CDC39P25655 PEX10YDR265W 1014 nt2.26□□□□□ -2.05
CDC39P25655 FMP10YER182W 735 nt2.26□□□□□ -2.05
CDC39P25655 RPL27AYHR010W 411 nt2.26□□□□□ -2.05
CDC39P25655 CDC73YLR418C 1182 nt2.26□□□□□ -2.05
CDC39P25655 SAS5YOR213C 747 nt2.26□□□□□ -2.05
CDC39P25655 YPL107WYPL107W 747 nt2.26□□□□□ -2.05
CDC39P25655 snR43snR43 209 nt2.26□□□□□ -2.05
CDC39P25655 VTC3YPL019C 2508 nt2.26□□□□□ -2.05
CDC39P25655 YFR032C-BYFR032C-B 264 nt2.26□□□□□ -2.05
CDC39P25655 YGR121W-AYGR121W-A 216 nt2.26□□□□□ -2.05
CDC39P25655 YHR052W-AYHR052W-A 195 nt2.26□□□□□ -2.05
CDC39P25655 YHR054W-AYHR054W-A 195 nt2.26□□□□□ -2.05
CDC39P25655 YKL091CYKL091C 933 nt2.26□□□□□ -2.05
CDC39P25655 MRP8YKL142W 660 nt2.26□□□□□ -2.05
CDC39P25655 TCB2YNL087W 3537 nt2.25□□□□□ -2.05
CDC39P25655 RAD7YJR052W 1698 nt2.25□□□□□ -2.05
CDC39P25655 RRM3YHR031C 2172 nt2.25□□□□□ -2.05
CDC39P25655 MOB2YFL034C-B 864 nt2.25□□□□□ -2.05
CDC39P25655 YKR070WYKR070W 1059 nt2.25□□□□□ -2.05
CDC39P25655 YBR300CYBR300C 498 nt2.25□□□□□ -2.05
CDC39P25655 SEC7YDR170C 6030 nt2.25□□□□□ -2.05
CDC39P25655 TRE2YOR256C 2430 nt2.25□□□□□ -2.05
CDC39P25655 MPC3YGR243W 441 nt2.24□□□□□ -2.05
CDC39P25655 SPO12YHR152W 522 nt2.24□□□□□ -2.05
CDC39P25655 YIL047C-AYIL047C-A 369 nt2.24□□□□□ -2.05
CDC39P25655 PDR3YBL005W 2931 nt2.24□□□□□ -2.05
CDC39P25655 TPP1YMR156C 717 nt2.24□□□□□ -2.05
CDC39P25655 YOR050CYOR050C 348 nt2.24□□□□□ -2.05
CDC39P25655 YPR015CYPR015C 744 nt2.24□□□□□ -2.05
CDC39P25655 CBP2YHL038C 1893 nt2.24□□□□□ -2.05
CDC39P25655 YAP5YIR018W 738 nt2.24□□□□□ -2.05
CDC39P25655 RPS21BYJL136C 264 nt2.24□□□□□ -2.05
CDC39P25655 CNA1YLR433C 1662 nt2.24□□□□□ -2.05
CDC39P25655 ERG9YHR190W 1335 nt2.23□□□□□ -2.05
CDC39P25655 YBR238CYBR238C 2196 nt2.23□□□□□ -2.05
CDC39P25655 TIF4631YGR162W 2859 nt2.23□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 25.3 ms