Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APCP25054 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.31■□□□□ 0.52
APCP25054 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APCP25054 AC079630.1-202ENST00000618127 1840 ntBASIC18.31■□□□□ 0.52
APCP25054 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.31■□□□□ 0.52
APCP25054 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APCP25054 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APCP25054 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APCP25054 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
APCP25054 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
APCP25054 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
APCP25054 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APCP25054 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APCP25054 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.3■□□□□ 0.52
APCP25054 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
APCP25054 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
APCP25054 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APCP25054 AC012618.2-201ENST00000428058 849 ntBASIC18.3■□□□□ 0.52
APCP25054 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.3■□□□□ 0.52
APCP25054 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APCP25054 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.3■□□□□ 0.52
APCP25054 AC097493.4-201ENST00000641197 219 ntBASIC18.3■□□□□ 0.52
APCP25054 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APCP25054 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APCP25054 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.3■□□□□ 0.52
APCP25054 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.3■□□□□ 0.52
APCP25054 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
APCP25054 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APCP25054 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APCP25054 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.29■□□□□ 0.52
APCP25054 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
APCP25054 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.29■□□□□ 0.52
APCP25054 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
APCP25054 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APCP25054 AL121749.1-202ENST00000609313 2153 ntBASIC18.29■□□□□ 0.52
APCP25054 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.29■□□□□ 0.52
APCP25054 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
APCP25054 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
APCP25054 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APCP25054 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.28■□□□□ 0.52
APCP25054 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APCP25054 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
APCP25054 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APCP25054 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
APCP25054 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.28■□□□□ 0.52
APCP25054 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.28■□□□□ 0.52
APCP25054 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
APCP25054 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
APCP25054 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APCP25054 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
APCP25054 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
APCP25054 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.28■□□□□ 0.52
APCP25054 C1QBPP2-201ENST00000528754 825 ntBASIC18.28■□□□□ 0.52
APCP25054 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.28■□□□□ 0.52
APCP25054 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.28■□□□□ 0.52
APCP25054 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APCP25054 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
APCP25054 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.28■□□□□ 0.52
APCP25054 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.27■□□□□ 0.52
APCP25054 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
APCP25054 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.27■□□□□ 0.52
APCP25054 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
APCP25054 AC012306.2-201ENST00000609350 630 ntBASIC18.27■□□□□ 0.52
APCP25054 FAM197Y4-202ENST00000622692 608 ntBASIC18.27■□□□□ 0.52
APCP25054 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
APCP25054 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
APCP25054 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.27■□□□□ 0.52
APCP25054 AL353803.4-201ENST00000565882 1934 ntBASIC18.27■□□□□ 0.51
APCP25054 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.27■□□□□ 0.51
APCP25054 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
APCP25054 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
APCP25054 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.26■□□□□ 0.51
APCP25054 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.26■□□□□ 0.51
APCP25054 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APCP25054 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.26■□□□□ 0.51
APCP25054 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
APCP25054 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
APCP25054 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.26■□□□□ 0.51
APCP25054 AC233263.1-201ENST00000578059 224 ntBASIC18.26■□□□□ 0.51
APCP25054 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.26■□□□□ 0.51
APCP25054 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.26■□□□□ 0.51
APCP25054 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APCP25054 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APCP25054 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APCP25054 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.26■□□□□ 0.51
APCP25054 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
APCP25054 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.26■□□□□ 0.51
APCP25054 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APCP25054 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.26■□□□□ 0.51
APCP25054 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.26■□□□□ 0.51
APCP25054 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
APCP25054 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APCP25054 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
APCP25054 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
APCP25054 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
APCP25054 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
APCP25054 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
APCP25054 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
APCP25054 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
APCP25054 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms