Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCK1P16333 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.19■□□□□ 0.82
NCK1P16333 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.19■□□□□ 0.82
NCK1P16333 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.19■□□□□ 0.82
NCK1P16333 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCK1P16333 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NCK1P16333 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NCK1P16333 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NCK1P16333 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCK1P16333 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
NCK1P16333 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCK1P16333 LINC01006-201ENST00000333319 2292 ntBASIC20.18■□□□□ 0.82
NCK1P16333 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NCK1P16333 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.18■□□□□ 0.82
NCK1P16333 AL499627.2-201ENST00000606283 725 ntBASIC20.18■□□□□ 0.82
NCK1P16333 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCK1P16333 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCK1P16333 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.18■□□□□ 0.82
NCK1P16333 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.18■□□□□ 0.82
NCK1P16333 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCK1P16333 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCK1P16333 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NCK1P16333 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.18■□□□□ 0.82
NCK1P16333 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NCK1P16333 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCK1P16333 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCK1P16333 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCK1P16333 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCK1P16333 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCK1P16333 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCK1P16333 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.17■□□□□ 0.82
NCK1P16333 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.17■□□□□ 0.82
NCK1P16333 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NCK1P16333 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.17■□□□□ 0.82
NCK1P16333 AC079089.2-201ENST00000531211 1277 ntBASIC20.17■□□□□ 0.82
NCK1P16333 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.17■□□□□ 0.82
NCK1P16333 AC092028.1-203ENST00000608262 953 ntBASIC20.17■□□□□ 0.82
NCK1P16333 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCK1P16333 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCK1P16333 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.17■□□□□ 0.82
NCK1P16333 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.17■□□□□ 0.82
NCK1P16333 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCK1P16333 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCK1P16333 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCK1P16333 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCK1P16333 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.16■□□□□ 0.82
NCK1P16333 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.16■□□□□ 0.82
NCK1P16333 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCK1P16333 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCK1P16333 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.16■□□□□ 0.82
NCK1P16333 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCK1P16333 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
NCK1P16333 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.16■□□□□ 0.82
NCK1P16333 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCK1P16333 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.16■□□□□ 0.82
NCK1P16333 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NCK1P16333 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
NCK1P16333 AC092667.1-201ENST00000434301 2586 ntBASIC20.16■□□□□ 0.82
NCK1P16333 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCK1P16333 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCK1P16333 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCK1P16333 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
NCK1P16333 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
NCK1P16333 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCK1P16333 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCK1P16333 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NCK1P16333 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.15■□□□□ 0.82
NCK1P16333 AC104564.3-201ENST00000582367 638 ntBASIC20.15■□□□□ 0.82
NCK1P16333 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.15■□□□□ 0.82
NCK1P16333 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCK1P16333 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.15■□□□□ 0.82
NCK1P16333 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
NCK1P16333 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NCK1P16333 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCK1P16333 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NCK1P16333 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.14■□□□□ 0.81
NCK1P16333 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCK1P16333 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCK1P16333 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCK1P16333 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.14■□□□□ 0.81
NCK1P16333 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCK1P16333 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.14■□□□□ 0.81
NCK1P16333 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCK1P16333 MTDHP2-201ENST00000601468 714 ntBASIC20.14■□□□□ 0.81
NCK1P16333 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCK1P16333 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.14■□□□□ 0.81
NCK1P16333 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
NCK1P16333 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCK1P16333 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCK1P16333 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.13■□□□□ 0.81
NCK1P16333 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCK1P16333 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.13■□□□□ 0.81
NCK1P16333 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NCK1P16333 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.13■□□□□ 0.81
NCK1P16333 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.13■□□□□ 0.81
NCK1P16333 AL031602.1-201ENST00000633169 911 ntBASIC20.13■□□□□ 0.81
NCK1P16333 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
NCK1P16333 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCK1P16333 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCK1P16333 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms