Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.28■□□□□ 0.84
LAMP1P11279 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LAMP1P11279 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LAMP1P11279 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.28■□□□□ 0.84
LAMP1P11279 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMP1P11279 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.28■□□□□ 0.84
LAMP1P11279 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.28■□□□□ 0.84
LAMP1P11279 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMP1P11279 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMP1P11279 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.28■□□□□ 0.84
LAMP1P11279 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMP1P11279 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMP1P11279 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.27■□□□□ 0.84
LAMP1P11279 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LAMP1P11279 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.27■□□□□ 0.84
LAMP1P11279 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LAMP1P11279 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LAMP1P11279 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LAMP1P11279 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LAMP1P11279 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LAMP1P11279 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.27■□□□□ 0.84
LAMP1P11279 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
LAMP1P11279 AC104564.3-201ENST00000582367 638 ntBASIC20.27■□□□□ 0.84
LAMP1P11279 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.27■□□□□ 0.84
LAMP1P11279 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LAMP1P11279 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LAMP1P11279 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.27■□□□□ 0.83
LAMP1P11279 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LAMP1P11279 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LAMP1P11279 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
LAMP1P11279 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LAMP1P11279 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LAMP1P11279 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LAMP1P11279 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.26■□□□□ 0.83
LAMP1P11279 AF106564.1-201ENST00000607058 2553 ntBASIC20.26■□□□□ 0.83
LAMP1P11279 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LAMP1P11279 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LAMP1P11279 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LAMP1P11279 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LAMP1P11279 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LAMP1P11279 FEM1AP4-201ENST00000443167 1987 ntBASIC20.26■□□□□ 0.83
LAMP1P11279 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LAMP1P11279 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LAMP1P11279 AP004607.7-201ENST00000527152 1677 ntBASIC20.26■□□□□ 0.83
LAMP1P11279 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LAMP1P11279 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LAMP1P11279 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LAMP1P11279 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LAMP1P11279 UNC93B3-201ENST00000308076 687 ntBASIC20.25■□□□□ 0.83
LAMP1P11279 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LAMP1P11279 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LAMP1P11279 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LAMP1P11279 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LAMP1P11279 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.25■□□□□ 0.83
LAMP1P11279 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.25■□□□□ 0.83
LAMP1P11279 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.24■□□□□ 0.83
LAMP1P11279 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.24■□□□□ 0.83
LAMP1P11279 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
LAMP1P11279 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LAMP1P11279 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.24■□□□□ 0.83
LAMP1P11279 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LAMP1P11279 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LAMP1P11279 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.24■□□□□ 0.83
LAMP1P11279 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LAMP1P11279 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LAMP1P11279 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.24■□□□□ 0.83
LAMP1P11279 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LAMP1P11279 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LAMP1P11279 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LAMP1P11279 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LAMP1P11279 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LAMP1P11279 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LAMP1P11279 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
LAMP1P11279 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LAMP1P11279 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.23■□□□□ 0.83
LAMP1P11279 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LAMP1P11279 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.23■□□□□ 0.83
LAMP1P11279 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.23■□□□□ 0.83
LAMP1P11279 AL034346.1-201ENST00000568244 1277 ntBASIC20.23■□□□□ 0.83
LAMP1P11279 MIR4767-201ENST00000582827 78 ntBASIC20.23■□□□□ 0.83
LAMP1P11279 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LAMP1P11279 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.23■□□□□ 0.83
LAMP1P11279 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
LAMP1P11279 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LAMP1P11279 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LAMP1P11279 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.22■□□□□ 0.83
LAMP1P11279 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LAMP1P11279 AC131212.1-201ENST00000613771 668 ntBASIC20.22■□□□□ 0.83
LAMP1P11279 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.22■□□□□ 0.83
LAMP1P11279 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.22■□□□□ 0.83
LAMP1P11279 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.22■□□□□ 0.83
LAMP1P11279 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LAMP1P11279 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LAMP1P11279 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LAMP1P11279 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LAMP1P11279 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LAMP1P11279 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LAMP1P11279 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LAMP1P11279 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LAMP1P11279 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms