Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.38■■□□□ 1.01
THRAP10827 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.38■■□□□ 1.01
THRAP10827 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
THRAP10827 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
THRAP10827 MIR572-201ENST00000384983 95 ntBASIC21.38■■□□□ 1.01
THRAP10827 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.38■■□□□ 1.01
THRAP10827 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
THRAP10827 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.38■■□□□ 1.01
THRAP10827 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
THRAP10827 AC010525.1-201ENST00000585559 441 ntBASIC21.38■■□□□ 1.01
THRAP10827 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
THRAP10827 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.38■■□□□ 1.01
THRAP10827 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.38■■□□□ 1.01
THRAP10827 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
THRAP10827 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.38■■□□□ 1.01
THRAP10827 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
THRAP10827 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
THRAP10827 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.37■■□□□ 1.01
THRAP10827 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
THRAP10827 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
THRAP10827 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
THRAP10827 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.37■■□□□ 1.01
THRAP10827 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
THRAP10827 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
THRAP10827 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
THRAP10827 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.37■■□□□ 1.01
THRAP10827 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.37■■□□□ 1.01
THRAP10827 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
THRAP10827 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
THRAP10827 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.37■■□□□ 1.01
THRAP10827 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
THRAP10827 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
THRAP10827 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
THRAP10827 AC026310.3-201ENST00000625186 2373 ntBASIC21.37■■□□□ 1.01
THRAP10827 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
THRAP10827 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
THRAP10827 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
THRAP10827 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
THRAP10827 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
THRAP10827 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.36■■□□□ 1.01
THRAP10827 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
THRAP10827 AC027612.3-201ENST00000413684 1047 ntBASIC21.36■■□□□ 1.01
THRAP10827 AC034268.1-201ENST00000441047 882 ntBASIC21.36■■□□□ 1.01
THRAP10827 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.36■■□□□ 1.01
THRAP10827 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.36■■□□□ 1.01
THRAP10827 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.36■■□□□ 1.01
THRAP10827 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
THRAP10827 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
THRAP10827 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
THRAP10827 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
THRAP10827 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
THRAP10827 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
THRAP10827 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.35■■□□□ 1.01
THRAP10827 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
THRAP10827 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.35■■□□□ 1.01
THRAP10827 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
THRAP10827 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
THRAP10827 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
THRAP10827 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.35■■□□□ 1.01
THRAP10827 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.35■■□□□ 1.01
THRAP10827 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
THRAP10827 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
THRAP10827 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
THRAP10827 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
THRAP10827 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
THRAP10827 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
THRAP10827 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
THRAP10827 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
THRAP10827 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
THRAP10827 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
THRAP10827 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.34■■□□□ 1.01
THRAP10827 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
THRAP10827 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
THRAP10827 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
THRAP10827 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
THRAP10827 AC012414.1-201ENST00000556676 535 ntBASIC21.34■■□□□ 1.01
THRAP10827 AL031602.1-201ENST00000633169 911 ntBASIC21.34■■□□□ 1.01
THRAP10827 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
THRAP10827 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.34■■□□□ 1.01
THRAP10827 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.33■■□□□ 1.01
THRAP10827 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
THRAP10827 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
THRAP10827 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
THRAP10827 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
THRAP10827 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
THRAP10827 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.33■■□□□ 1.01
THRAP10827 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
THRAP10827 AL354811.1-201ENST00000610286 706 ntBASIC21.33■■□□□ 1.01
THRAP10827 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.33■■□□□ 1.01
THRAP10827 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
THRAP10827 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
THRAP10827 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.33■■□□□ 1
THRAP10827 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.33■■□□□ 1
THRAP10827 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
THRAP10827 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.33■■□□□ 1
THRAP10827 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.32■■□□□ 1
THRAP10827 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
THRAP10827 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
THRAP10827 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.32■■□□□ 1
THRAP10827 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms