Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AC079089.2-201ENST00000531211 1277 ntBASIC16.26■□□□□ 0.19
TCRAP04437 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TCRAP04437 AL499627.2-201ENST00000606283 725 ntBASIC16.26■□□□□ 0.19
TCRAP04437 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
TCRAP04437 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRAP04437 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRAP04437 KRT8P33-201ENST00000508125 1423 ntBASIC16.26■□□□□ 0.19
TCRAP04437 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRAP04437 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRAP04437 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.26■□□□□ 0.19
TCRAP04437 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TCRAP04437 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRAP04437 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRAP04437 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRAP04437 OXCT2P1-201ENST00000447263 1535 ntBASIC16.25■□□□□ 0.19
TCRAP04437 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.25■□□□□ 0.19
TCRAP04437 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TCRAP04437 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRAP04437 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRAP04437 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRAP04437 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRAP04437 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TCRAP04437 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.25■□□□□ 0.19
TCRAP04437 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TCRAP04437 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.25■□□□□ 0.19
TCRAP04437 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TCRAP04437 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.25■□□□□ 0.19
TCRAP04437 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TCRAP04437 AL031848.2-201ENST00000607670 837 ntBASIC16.25■□□□□ 0.19
TCRAP04437 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.25■□□□□ 0.19
TCRAP04437 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TCRAP04437 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.25■□□□□ 0.19
TCRAP04437 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.25■□□□□ 0.19
TCRAP04437 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.25■□□□□ 0.19
TCRAP04437 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TCRAP04437 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TCRAP04437 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TCRAP04437 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRAP04437 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRAP04437 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRAP04437 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
TCRAP04437 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TCRAP04437 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.24■□□□□ 0.19
TCRAP04437 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRAP04437 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.24■□□□□ 0.19
TCRAP04437 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRAP04437 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRAP04437 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TCRAP04437 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRAP04437 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRAP04437 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.24■□□□□ 0.19
TCRAP04437 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TCRAP04437 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TCRAP04437 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRAP04437 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRAP04437 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TCRAP04437 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TCRAP04437 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRAP04437 AL121603.2-201ENST00000557373 2117 ntBASIC16.24■□□□□ 0.19
TCRAP04437 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRAP04437 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRAP04437 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.23■□□□□ 0.19
TCRAP04437 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRAP04437 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TCRAP04437 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRAP04437 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.23■□□□□ 0.19
TCRAP04437 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRAP04437 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRAP04437 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.23■□□□□ 0.19
TCRAP04437 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRAP04437 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TCRAP04437 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.23■□□□□ 0.19
TCRAP04437 BX664725.1-201ENST00000438252 379 ntBASIC16.23■□□□□ 0.19
TCRAP04437 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.23■□□□□ 0.19
TCRAP04437 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TCRAP04437 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRAP04437 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRAP04437 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.23■□□□□ 0.19
TCRAP04437 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRAP04437 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRAP04437 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRAP04437 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRAP04437 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TCRAP04437 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.22■□□□□ 0.19
TCRAP04437 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TCRAP04437 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TCRAP04437 OR7E47P-201ENST00000546390 1422 ntBASIC16.22■□□□□ 0.19
TCRAP04437 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRAP04437 AC092667.1-201ENST00000434301 2586 ntBASIC16.22■□□□□ 0.19
TCRAP04437 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRAP04437 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.22■□□□□ 0.19
TCRAP04437 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRAP04437 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TCRAP04437 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.22■□□□□ 0.19
TCRAP04437 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TCRAP04437 AL031602.1-201ENST00000633169 911 ntBASIC16.22■□□□□ 0.19
TCRAP04437 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRAP04437 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRAP04437 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRAP04437 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms