Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND4P03905 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND4P03905 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND4P03905 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND4P03905 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND4P03905 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND4P03905 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND4P03905 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND4P03905 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND4P03905 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND4P03905 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND4P03905 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
MT-ND4P03905 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND4P03905 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND4P03905 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND4P03905 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND4P03905 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND4P03905 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.54■□□□□ 0.56
MT-ND4P03905 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MT-ND4P03905 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
MT-ND4P03905 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.54■□□□□ 0.56
MT-ND4P03905 AC239859.2-201ENST00000444165 318 ntBASIC18.54■□□□□ 0.56
MT-ND4P03905 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND4P03905 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND4P03905 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.54■□□□□ 0.56
MT-ND4P03905 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND4P03905 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.54■□□□□ 0.56
MT-ND4P03905 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.53■□□□□ 0.56
MT-ND4P03905 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.53■□□□□ 0.56
MT-ND4P03905 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MT-ND4P03905 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND4P03905 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND4P03905 LINC01960-201ENST00000563759 1884 ntBASIC18.53■□□□□ 0.56
MT-ND4P03905 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND4P03905 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND4P03905 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MT-ND4P03905 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.53■□□□□ 0.56
MT-ND4P03905 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND4P03905 AL391422.3-201ENST00000603791 2761 ntBASIC18.53■□□□□ 0.56
MT-ND4P03905 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND4P03905 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.53■□□□□ 0.56
MT-ND4P03905 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MT-ND4P03905 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MT-ND4P03905 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MT-ND4P03905 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.52■□□□□ 0.56
MT-ND4P03905 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.52■□□□□ 0.56
MT-ND4P03905 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.52■□□□□ 0.56
MT-ND4P03905 MTDHP2-201ENST00000601468 714 ntBASIC18.52■□□□□ 0.56
MT-ND4P03905 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MT-ND4P03905 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.52■□□□□ 0.56
MT-ND4P03905 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MT-ND4P03905 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.52■□□□□ 0.55
MT-ND4P03905 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
MT-ND4P03905 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.52■□□□□ 0.55
MT-ND4P03905 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.52■□□□□ 0.55
MT-ND4P03905 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MT-ND4P03905 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MT-ND4P03905 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MT-ND4P03905 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.51■□□□□ 0.55
MT-ND4P03905 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MT-ND4P03905 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-ND4P03905 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-ND4P03905 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
MT-ND4P03905 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MT-ND4P03905 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-ND4P03905 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-ND4P03905 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.51■□□□□ 0.55
MT-ND4P03905 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-ND4P03905 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-ND4P03905 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-ND4P03905 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.51■□□□□ 0.55
MT-ND4P03905 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.51■□□□□ 0.55
MT-ND4P03905 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MT-ND4P03905 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-ND4P03905 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-ND4P03905 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
MT-ND4P03905 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.5■□□□□ 0.55
MT-ND4P03905 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-ND4P03905 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
MT-ND4P03905 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.5■□□□□ 0.55
MT-ND4P03905 AC009299.2-201ENST00000482477 511 ntBASIC18.5■□□□□ 0.55
MT-ND4P03905 AC010997.5-201ENST00000609182 354 ntBASIC18.5■□□□□ 0.55
MT-ND4P03905 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.5■□□□□ 0.55
MT-ND4P03905 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-ND4P03905 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MT-ND4P03905 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-ND4P03905 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
MT-ND4P03905 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MT-ND4P03905 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.5■□□□□ 0.55
MT-ND4P03905 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-ND4P03905 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.5■□□□□ 0.55
MT-ND4P03905 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND4P03905 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
MT-ND4P03905 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.49■□□□□ 0.55
MT-ND4P03905 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND4P03905 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.49■□□□□ 0.55
MT-ND4P03905 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
MT-ND4P03905 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND4P03905 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.49■□□□□ 0.55
MT-ND4P03905 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms