Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT6AP02538 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT6AP02538 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT6AP02538 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT6AP02538 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT6AP02538 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.7■□□□□ 0.91
KRT6AP02538 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.7■□□□□ 0.9
KRT6AP02538 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.7■□□□□ 0.9
KRT6AP02538 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT6AP02538 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
KRT6AP02538 AC104564.3-201ENST00000582367 638 ntBASIC20.7■□□□□ 0.9
KRT6AP02538 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.7■□□□□ 0.9
KRT6AP02538 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT6AP02538 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
KRT6AP02538 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT6AP02538 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT6AP02538 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6AP02538 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
KRT6AP02538 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6AP02538 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
KRT6AP02538 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6AP02538 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6AP02538 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT6AP02538 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6AP02538 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
KRT6AP02538 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6AP02538 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT6AP02538 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6AP02538 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
KRT6AP02538 AL137060.1-201ENST00000618151 2648 ntBASIC20.69■□□□□ 0.9
KRT6AP02538 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6AP02538 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6AP02538 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
KRT6AP02538 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.68■□□□□ 0.9
KRT6AP02538 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT6AP02538 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT6AP02538 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT6AP02538 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.68■□□□□ 0.9
KRT6AP02538 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.68■□□□□ 0.9
KRT6AP02538 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
KRT6AP02538 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT6AP02538 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT6AP02538 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
KRT6AP02538 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT6AP02538 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT6AP02538 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT6AP02538 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
KRT6AP02538 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRT6AP02538 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT6AP02538 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT6AP02538 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRT6AP02538 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
KRT6AP02538 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT6AP02538 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT6AP02538 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
KRT6AP02538 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
KRT6AP02538 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT6AP02538 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6AP02538 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6AP02538 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6AP02538 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6AP02538 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.66■□□□□ 0.9
KRT6AP02538 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
KRT6AP02538 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6AP02538 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6AP02538 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6AP02538 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6AP02538 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
KRT6AP02538 AC026471.6-201ENST00000622954 1905 ntBASIC20.66■□□□□ 0.9
KRT6AP02538 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6AP02538 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
KRT6AP02538 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6AP02538 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.65■□□□□ 0.9
KRT6AP02538 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.65■□□□□ 0.9
KRT6AP02538 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6AP02538 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6AP02538 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6AP02538 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6AP02538 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6AP02538 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6AP02538 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6AP02538 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6AP02538 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6AP02538 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.65■□□□□ 0.9
KRT6AP02538 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.65■□□□□ 0.9
KRT6AP02538 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6AP02538 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6AP02538 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6AP02538 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
KRT6AP02538 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6AP02538 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
KRT6AP02538 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KRT6AP02538 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
KRT6AP02538 Z98882.1-201ENST00000622160 2253 ntBASIC20.64■□□□□ 0.89
KRT6AP02538 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT6AP02538 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT6AP02538 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT6AP02538 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT6AP02538 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT6AP02538 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms