Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOD1P00441 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.21■□□□□ 0.99
SOD1P00441 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.21■□□□□ 0.99
SOD1P00441 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.21■□□□□ 0.99
SOD1P00441 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SOD1P00441 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SOD1P00441 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.21■□□□□ 0.99
SOD1P00441 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SOD1P00441 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOD1P00441 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SOD1P00441 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.21■□□□□ 0.99
SOD1P00441 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SOD1P00441 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SOD1P00441 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.2■□□□□ 0.98
SOD1P00441 KRT87P-202ENST00000534226 1464 ntBASIC21.2■□□□□ 0.98
SOD1P00441 AC242852.2-201ENST00000615738 1807 ntBASIC21.2■□□□□ 0.98
SOD1P00441 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.2■□□□□ 0.98
SOD1P00441 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SOD1P00441 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.2■□□□□ 0.98
SOD1P00441 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SOD1P00441 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SOD1P00441 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SOD1P00441 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SOD1P00441 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.19■□□□□ 0.98
SOD1P00441 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOD1P00441 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOD1P00441 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SOD1P00441 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOD1P00441 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SOD1P00441 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOD1P00441 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.19■□□□□ 0.98
SOD1P00441 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.19■□□□□ 0.98
SOD1P00441 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SOD1P00441 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SOD1P00441 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOD1P00441 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOD1P00441 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOD1P00441 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SOD1P00441 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOD1P00441 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOD1P00441 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SOD1P00441 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOD1P00441 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.18■□□□□ 0.98
SOD1P00441 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOD1P00441 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.18■□□□□ 0.98
SOD1P00441 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SOD1P00441 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SOD1P00441 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SOD1P00441 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOD1P00441 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOD1P00441 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOD1P00441 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.17■□□□□ 0.98
SOD1P00441 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOD1P00441 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SOD1P00441 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOD1P00441 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SOD1P00441 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.17■□□□□ 0.98
SOD1P00441 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
SOD1P00441 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.17■□□□□ 0.98
SOD1P00441 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.17■□□□□ 0.98
SOD1P00441 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.17■□□□□ 0.98
SOD1P00441 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.17■□□□□ 0.98
SOD1P00441 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SOD1P00441 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.17■□□□□ 0.98
SOD1P00441 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SOD1P00441 AC026471.6-201ENST00000622954 1905 ntBASIC21.17■□□□□ 0.98
SOD1P00441 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOD1P00441 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SOD1P00441 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOD1P00441 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.16■□□□□ 0.98
SOD1P00441 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SOD1P00441 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOD1P00441 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.16■□□□□ 0.98
SOD1P00441 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SOD1P00441 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SOD1P00441 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOD1P00441 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOD1P00441 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOD1P00441 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.15■□□□□ 0.98
SOD1P00441 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
SOD1P00441 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SOD1P00441 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SOD1P00441 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SOD1P00441 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SOD1P00441 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.15■□□□□ 0.98
SOD1P00441 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.15■□□□□ 0.98
SOD1P00441 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.15■□□□□ 0.98
SOD1P00441 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.15■□□□□ 0.98
SOD1P00441 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.15■□□□□ 0.98
SOD1P00441 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.15■□□□□ 0.98
SOD1P00441 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.15■□□□□ 0.98
SOD1P00441 AC104187.1-201ENST00000607510 612 ntBASIC21.15■□□□□ 0.98
SOD1P00441 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SOD1P00441 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SOD1P00441 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
SOD1P00441 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.14■□□□□ 0.97
SOD1P00441 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.14■□□□□ 0.97
SOD1P00441 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.14■□□□□ 0.97
SOD1P00441 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.14■□□□□ 0.97
SOD1P00441 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms