Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC9.71□□□□□ -0.86
USH2AO75445 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
USH2AO75445 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
USH2AO75445 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
USH2AO75445 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
USH2AO75445 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
USH2AO75445 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
USH2AO75445 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
USH2AO75445 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
USH2AO75445 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
USH2AO75445 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
USH2AO75445 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC9.7□□□□□ -0.86
USH2AO75445 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC9.7□□□□□ -0.86
USH2AO75445 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
USH2AO75445 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
USH2AO75445 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
USH2AO75445 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
USH2AO75445 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC9.7□□□□□ -0.86
USH2AO75445 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC9.7□□□□□ -0.86
USH2AO75445 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
USH2AO75445 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC9.7□□□□□ -0.86
USH2AO75445 AC009237.3-201ENST00000393279 1427 ntBASIC9.7□□□□□ -0.86
USH2AO75445 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
USH2AO75445 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC9.7□□□□□ -0.86
USH2AO75445 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC9.7□□□□□ -0.86
USH2AO75445 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
USH2AO75445 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
USH2AO75445 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
USH2AO75445 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
USH2AO75445 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC9.7□□□□□ -0.86
USH2AO75445 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
USH2AO75445 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
USH2AO75445 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC9.7□□□□□ -0.86
USH2AO75445 RMI2-205ENST00000576027 818 ntTSL 2 BASIC9.7□□□□□ -0.86
USH2AO75445 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
USH2AO75445 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
USH2AO75445 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC9.7□□□□□ -0.86
USH2AO75445 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
USH2AO75445 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
USH2AO75445 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
USH2AO75445 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC9.7□□□□□ -0.86
USH2AO75445 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC9.7□□□□□ -0.86
USH2AO75445 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
USH2AO75445 CEBPA-AS1-201ENST00000592982 2198 ntBASIC9.69□□□□□ -0.86
USH2AO75445 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
USH2AO75445 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
USH2AO75445 RPS2P55-201ENST00000397318 883 ntBASIC9.69□□□□□ -0.86
USH2AO75445 RN7SL471P-201ENST00000580476 299 ntBASIC9.69□□□□□ -0.86
USH2AO75445 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
USH2AO75445 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
USH2AO75445 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
USH2AO75445 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
USH2AO75445 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
USH2AO75445 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC9.69□□□□□ -0.86
USH2AO75445 AL355472.2-201ENST00000422958 438 ntBASIC9.69□□□□□ -0.86
USH2AO75445 AC107956.1-201ENST00000494359 873 ntBASIC9.69□□□□□ -0.86
USH2AO75445 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC9.69□□□□□ -0.86
USH2AO75445 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
USH2AO75445 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC9.69□□□□□ -0.86
USH2AO75445 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
USH2AO75445 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
USH2AO75445 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
USH2AO75445 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC9.69□□□□□ -0.86
USH2AO75445 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC9.69□□□□□ -0.86
USH2AO75445 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
USH2AO75445 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC9.69□□□□□ -0.86
USH2AO75445 AC010141.3-201ENST00000456659 717 ntBASIC9.69□□□□□ -0.86
USH2AO75445 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
USH2AO75445 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC9.69□□□□□ -0.86
USH2AO75445 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC9.69□□□□□ -0.86
USH2AO75445 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
USH2AO75445 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC9.68□□□□□ -0.86
USH2AO75445 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC9.68□□□□□ -0.86
USH2AO75445 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
USH2AO75445 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
USH2AO75445 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
USH2AO75445 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC9.68□□□□□ -0.86
USH2AO75445 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC9.68□□□□□ -0.86
USH2AO75445 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
USH2AO75445 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
USH2AO75445 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
USH2AO75445 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC9.68□□□□□ -0.86
USH2AO75445 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC9.68□□□□□ -0.86
USH2AO75445 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC9.68□□□□□ -0.86
USH2AO75445 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
USH2AO75445 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC9.68□□□□□ -0.86
USH2AO75445 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
USH2AO75445 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC9.68□□□□□ -0.86
USH2AO75445 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC9.68□□□□□ -0.86
USH2AO75445 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC9.68□□□□□ -0.86
USH2AO75445 EEF1DP3-203ENST00000566025 782 ntBASIC9.68□□□□□ -0.86
USH2AO75445 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
USH2AO75445 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
USH2AO75445 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC9.68□□□□□ -0.86
USH2AO75445 CRAT-202ENST00000393384 973 ntTSL 2 BASIC9.68□□□□□ -0.86
USH2AO75445 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
USH2AO75445 AL355075.4-201ENST00000554988 638 ntBASIC9.68□□□□□ -0.86
USH2AO75445 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
USH2AO75445 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
USH2AO75445 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms