Protein–RNA interactions for Protein: O43678

NDUFA2, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA2O43678 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFA2O43678 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFA2O43678 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NDUFA2O43678 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFA2O43678 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.3■□□□□ 0.52
NDUFA2O43678 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFA2O43678 AC019069.1-201ENST00000610008 1333 ntBASIC18.3■□□□□ 0.52
NDUFA2O43678 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFA2O43678 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.3■□□□□ 0.52
NDUFA2O43678 AC010525.1-201ENST00000585559 441 ntBASIC18.3■□□□□ 0.52
NDUFA2O43678 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NDUFA2O43678 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFA2O43678 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFA2O43678 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA2O43678 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.29■□□□□ 0.52
NDUFA2O43678 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.29■□□□□ 0.52
NDUFA2O43678 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA2O43678 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA2O43678 IGHV3-19-201ENST00000521488 291 ntBASIC18.29■□□□□ 0.52
NDUFA2O43678 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA2O43678 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA2O43678 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA2O43678 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NDUFA2O43678 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFA2O43678 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFA2O43678 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFA2O43678 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFA2O43678 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
NDUFA2O43678 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFA2O43678 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFA2O43678 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
NDUFA2O43678 AC010141.3-201ENST00000456659 717 ntBASIC18.28■□□□□ 0.52
NDUFA2O43678 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.28■□□□□ 0.52
NDUFA2O43678 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFA2O43678 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
NDUFA2O43678 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NDUFA2O43678 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.27■□□□□ 0.52
NDUFA2O43678 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
NDUFA2O43678 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NDUFA2O43678 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NDUFA2O43678 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NDUFA2O43678 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.27■□□□□ 0.52
NDUFA2O43678 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NDUFA2O43678 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NDUFA2O43678 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.27■□□□□ 0.51
NDUFA2O43678 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
NDUFA2O43678 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.27■□□□□ 0.51
NDUFA2O43678 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFA2O43678 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFA2O43678 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFA2O43678 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFA2O43678 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFA2O43678 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFA2O43678 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NDUFA2O43678 LINC01960-201ENST00000563759 1884 ntBASIC18.26■□□□□ 0.51
NDUFA2O43678 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.26■□□□□ 0.51
NDUFA2O43678 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFA2O43678 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFA2O43678 AL158211.5-201ENST00000623583 2518 ntBASIC18.25■□□□□ 0.51
NDUFA2O43678 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFA2O43678 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFA2O43678 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.25■□□□□ 0.51
NDUFA2O43678 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
NDUFA2O43678 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFA2O43678 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFA2O43678 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.25■□□□□ 0.51
NDUFA2O43678 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.25■□□□□ 0.51
NDUFA2O43678 AC105265.2-201ENST00000467189 838 ntBASIC18.25■□□□□ 0.51
NDUFA2O43678 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.25■□□□□ 0.51
NDUFA2O43678 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFA2O43678 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFA2O43678 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFA2O43678 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFA2O43678 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFA2O43678 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.25■□□□□ 0.51
NDUFA2O43678 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NDUFA2O43678 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.25■□□□□ 0.51
NDUFA2O43678 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFA2O43678 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFA2O43678 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NDUFA2O43678 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFA2O43678 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NDUFA2O43678 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.24■□□□□ 0.51
NDUFA2O43678 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFA2O43678 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.24■□□□□ 0.51
NDUFA2O43678 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFA2O43678 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFA2O43678 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFA2O43678 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFA2O43678 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NDUFA2O43678 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.24■□□□□ 0.51
NDUFA2O43678 TSPY26P-201ENST00000476365 1326 ntBASIC18.23■□□□□ 0.51
NDUFA2O43678 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFA2O43678 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFA2O43678 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.23■□□□□ 0.51
NDUFA2O43678 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.23■□□□□ 0.51
NDUFA2O43678 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.23■□□□□ 0.51
NDUFA2O43678 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFA2O43678 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
NDUFA2O43678 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms