Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF13O43567 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF13O43567 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF13O43567 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF13O43567 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF13O43567 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RNF13O43567 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF13O43567 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RNF13O43567 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF13O43567 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RNF13O43567 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF13O43567 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF13O43567 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RNF13O43567 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF13O43567 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF13O43567 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF13O43567 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF13O43567 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF13O43567 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RNF13O43567 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF13O43567 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF13O43567 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF13O43567 UNC93B3-201ENST00000308076 687 ntBASIC19.43■□□□□ 0.7
RNF13O43567 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF13O43567 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF13O43567 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF13O43567 AC010141.3-201ENST00000456659 717 ntBASIC19.43■□□□□ 0.7
RNF13O43567 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF13O43567 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
RNF13O43567 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF13O43567 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF13O43567 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF13O43567 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF13O43567 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF13O43567 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF13O43567 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF13O43567 SLC47A1P1-202ENST00000449666 945 ntBASIC19.42■□□□□ 0.7
RNF13O43567 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF13O43567 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RNF13O43567 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF13O43567 OR7E47P-201ENST00000546390 1422 ntBASIC19.42■□□□□ 0.7
RNF13O43567 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF13O43567 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF13O43567 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
RNF13O43567 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RNF13O43567 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF13O43567 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF13O43567 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF13O43567 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF13O43567 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF13O43567 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF13O43567 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF13O43567 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RNF13O43567 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF13O43567 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RNF13O43567 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF13O43567 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RNF13O43567 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF13O43567 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF13O43567 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF13O43567 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF13O43567 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.4■□□□□ 0.7
RNF13O43567 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF13O43567 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF13O43567 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF13O43567 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF13O43567 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
RNF13O43567 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF13O43567 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF13O43567 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF13O43567 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF13O43567 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RNF13O43567 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF13O43567 MIR4767-201ENST00000582827 78 ntBASIC19.39■□□□□ 0.69
RNF13O43567 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF13O43567 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF13O43567 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF13O43567 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.69
RNF13O43567 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF13O43567 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
RNF13O43567 AC005229.4-201ENST00000610085 2198 ntBASIC19.39■□□□□ 0.69
RNF13O43567 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF13O43567 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF13O43567 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF13O43567 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF13O43567 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF13O43567 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RNF13O43567 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF13O43567 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RNF13O43567 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF13O43567 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF13O43567 AL136162.1-201ENST00000607711 1078 ntBASIC19.38■□□□□ 0.69
RNF13O43567 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF13O43567 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RNF13O43567 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
RNF13O43567 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF13O43567 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF13O43567 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF13O43567 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF13O43567 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms