Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.27■■□□□ 1
PHGDHO43175 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.27■■□□□ 1
PHGDHO43175 AL138724.1-201ENST00000606771 1088 ntBASIC21.27■■□□□ 1
PHGDHO43175 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
PHGDHO43175 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PHGDHO43175 OXCT2P1-201ENST00000447263 1535 ntBASIC21.27■■□□□ 1
PHGDHO43175 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.27■■□□□ 1
PHGDHO43175 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.27■■□□□ 1
PHGDHO43175 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.27■■□□□ 1
PHGDHO43175 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PHGDHO43175 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PHGDHO43175 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PHGDHO43175 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PHGDHO43175 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.26■□□□□ 0.99
PHGDHO43175 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.26■□□□□ 0.99
PHGDHO43175 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PHGDHO43175 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.26■□□□□ 0.99
PHGDHO43175 SLC47A1P1-202ENST00000449666 945 ntBASIC21.26■□□□□ 0.99
PHGDHO43175 AC136469.2-201ENST00000623944 1028 ntBASIC21.26■□□□□ 0.99
PHGDHO43175 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PHGDHO43175 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
PHGDHO43175 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.26■□□□□ 0.99
PHGDHO43175 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PHGDHO43175 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PHGDHO43175 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.26■□□□□ 0.99
PHGDHO43175 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.25■□□□□ 0.99
PHGDHO43175 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PHGDHO43175 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.25■□□□□ 0.99
PHGDHO43175 AL024507.2-201ENST00000606070 2574 ntBASIC21.25■□□□□ 0.99
PHGDHO43175 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PHGDHO43175 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PHGDHO43175 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PHGDHO43175 DUX4L19-201ENST00000557448 1267 ntBASIC21.25■□□□□ 0.99
PHGDHO43175 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.25■□□□□ 0.99
PHGDHO43175 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PHGDHO43175 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.25■□□□□ 0.99
PHGDHO43175 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PHGDHO43175 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PHGDHO43175 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PHGDHO43175 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.24■□□□□ 0.99
PHGDHO43175 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PHGDHO43175 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PHGDHO43175 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PHGDHO43175 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PHGDHO43175 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PHGDHO43175 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.24■□□□□ 0.99
PHGDHO43175 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PHGDHO43175 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.24■□□□□ 0.99
PHGDHO43175 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.24■□□□□ 0.99
PHGDHO43175 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.24■□□□□ 0.99
PHGDHO43175 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PHGDHO43175 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PHGDHO43175 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.24■□□□□ 0.99
PHGDHO43175 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PHGDHO43175 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PHGDHO43175 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
PHGDHO43175 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PHGDHO43175 FEM1AP4-201ENST00000443167 1987 ntBASIC21.23■□□□□ 0.99
PHGDHO43175 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PHGDHO43175 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PHGDHO43175 AC011298.3-201ENST00000615796 283 ntBASIC21.23■□□□□ 0.99
PHGDHO43175 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PHGDHO43175 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PHGDHO43175 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PHGDHO43175 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.23■□□□□ 0.99
PHGDHO43175 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.22■□□□□ 0.99
PHGDHO43175 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PHGDHO43175 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PHGDHO43175 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PHGDHO43175 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
PHGDHO43175 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.22■□□□□ 0.99
PHGDHO43175 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.22■□□□□ 0.99
PHGDHO43175 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PHGDHO43175 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
PHGDHO43175 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
PHGDHO43175 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PHGDHO43175 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.22■□□□□ 0.99
PHGDHO43175 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PHGDHO43175 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PHGDHO43175 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PHGDHO43175 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PHGDHO43175 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PHGDHO43175 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.22■□□□□ 0.99
PHGDHO43175 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.21■□□□□ 0.99
PHGDHO43175 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PHGDHO43175 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PHGDHO43175 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.21■□□□□ 0.99
PHGDHO43175 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PHGDHO43175 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PHGDHO43175 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PHGDHO43175 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.21■□□□□ 0.99
PHGDHO43175 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PHGDHO43175 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PHGDHO43175 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PHGDHO43175 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.21■□□□□ 0.99
PHGDHO43175 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.21■□□□□ 0.99
PHGDHO43175 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PHGDHO43175 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.21■□□□□ 0.99
PHGDHO43175 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PHGDHO43175 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms