Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.02■□□□□ 0.64
NPIPB4C9JG80 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPB4C9JG80 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.02■□□□□ 0.64
NPIPB4C9JG80 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPB4C9JG80 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.02■□□□□ 0.63
NPIPB4C9JG80 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.02■□□□□ 0.63
NPIPB4C9JG80 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
NPIPB4C9JG80 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
NPIPB4C9JG80 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPB4C9JG80 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.01■□□□□ 0.63
NPIPB4C9JG80 TSPY26P-201ENST00000476365 1326 ntBASIC19.01■□□□□ 0.63
NPIPB4C9JG80 AC003102.1-202ENST00000563394 1796 ntBASIC19.01■□□□□ 0.63
NPIPB4C9JG80 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPB4C9JG80 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPB4C9JG80 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.01■□□□□ 0.63
NPIPB4C9JG80 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.01■□□□□ 0.63
NPIPB4C9JG80 AF213884.3-201ENST00000563833 479 ntBASIC19.01■□□□□ 0.63
NPIPB4C9JG80 AL139246.5-201ENST00000606645 996 ntBASIC19.01■□□□□ 0.63
NPIPB4C9JG80 AL136967.2-201ENST00000623968 743 ntBASIC19.01■□□□□ 0.63
NPIPB4C9JG80 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.01■□□□□ 0.63
NPIPB4C9JG80 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPB4C9JG80 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPB4C9JG80 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NPIPB4C9JG80 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.01■□□□□ 0.63
NPIPB4C9JG80 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPB4C9JG80 Z98882.1-201ENST00000622160 2253 ntBASIC19■□□□□ 0.63
NPIPB4C9JG80 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPB4C9JG80 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NPIPB4C9JG80 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPB4C9JG80 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19■□□□□ 0.63
NPIPB4C9JG80 MIR572-201ENST00000384983 95 ntBASIC19■□□□□ 0.63
NPIPB4C9JG80 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19■□□□□ 0.63
NPIPB4C9JG80 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19■□□□□ 0.63
NPIPB4C9JG80 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NPIPB4C9JG80 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19■□□□□ 0.63
NPIPB4C9JG80 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19■□□□□ 0.63
NPIPB4C9JG80 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPB4C9JG80 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NPIPB4C9JG80 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPB4C9JG80 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPB4C9JG80 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPB4C9JG80 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19■□□□□ 0.63
NPIPB4C9JG80 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19■□□□□ 0.63
NPIPB4C9JG80 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19■□□□□ 0.63
NPIPB4C9JG80 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPIPB4C9JG80 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPB4C9JG80 AC026310.3-201ENST00000625186 2373 ntBASIC18.99■□□□□ 0.63
NPIPB4C9JG80 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPB4C9JG80 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.99■□□□□ 0.63
NPIPB4C9JG80 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPB4C9JG80 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPB4C9JG80 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NPIPB4C9JG80 SUDS3P1-201ENST00000505831 966 ntBASIC18.99■□□□□ 0.63
NPIPB4C9JG80 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.99■□□□□ 0.63
NPIPB4C9JG80 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.99■□□□□ 0.63
NPIPB4C9JG80 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.99■□□□□ 0.63
NPIPB4C9JG80 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPB4C9JG80 AC105233.4-201ENST00000642045 216 ntBASIC18.99■□□□□ 0.63
NPIPB4C9JG80 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPB4C9JG80 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.98■□□□□ 0.63
NPIPB4C9JG80 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPB4C9JG80 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
NPIPB4C9JG80 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPB4C9JG80 AC007375.3-201ENST00000600936 2314 ntBASIC18.98■□□□□ 0.63
NPIPB4C9JG80 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPB4C9JG80 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPB4C9JG80 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.98■□□□□ 0.63
NPIPB4C9JG80 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
NPIPB4C9JG80 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPB4C9JG80 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.96■□□□□ 0.63
NPIPB4C9JG80 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPB4C9JG80 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPB4C9JG80 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPB4C9JG80 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPB4C9JG80 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.96■□□□□ 0.63
NPIPB4C9JG80 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPB4C9JG80 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPB4C9JG80 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NPIPB4C9JG80 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms