Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
LINC00473A8K010 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00473A8K010 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
LINC00473A8K010 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC00473A8K010 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00473A8K010 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LINC00473A8K010 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00473A8K010 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC00473A8K010 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00473A8K010 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LINC00473A8K010 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LINC00473A8K010 SLC47A1P1-202ENST00000449666 945 ntBASIC17.42■□□□□ 0.38
LINC00473A8K010 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC00473A8K010 AC104564.3-201ENST00000582367 638 ntBASIC17.42■□□□□ 0.38
LINC00473A8K010 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.42■□□□□ 0.38
LINC00473A8K010 AC011298.3-201ENST00000615796 283 ntBASIC17.42■□□□□ 0.38
LINC00473A8K010 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00473A8K010 AL024507.2-201ENST00000606070 2574 ntBASIC17.42■□□□□ 0.38
LINC00473A8K010 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00473A8K010 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00473A8K010 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00473A8K010 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00473A8K010 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC00473A8K010 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00473A8K010 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00473A8K010 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC00473A8K010 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00473A8K010 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00473A8K010 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00473A8K010 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00473A8K010 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00473A8K010 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00473A8K010 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00473A8K010 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00473A8K010 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LINC00473A8K010 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00473A8K010 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00473A8K010 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00473A8K010 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00473A8K010 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.4■□□□□ 0.38
LINC00473A8K010 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00473A8K010 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LINC00473A8K010 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00473A8K010 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00473A8K010 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00473A8K010 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LINC00473A8K010 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LINC00473A8K010 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.4■□□□□ 0.38
LINC00473A8K010 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC00473A8K010 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.4■□□□□ 0.38
LINC00473A8K010 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC00473A8K010 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.4■□□□□ 0.38
LINC00473A8K010 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00473A8K010 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00473A8K010 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.4■□□□□ 0.38
LINC00473A8K010 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00473A8K010 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
LINC00473A8K010 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00473A8K010 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
LINC00473A8K010 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00473A8K010 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.39■□□□□ 0.37
LINC00473A8K010 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.39■□□□□ 0.37
LINC00473A8K010 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00473A8K010 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
LINC00473A8K010 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00473A8K010 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00473A8K010 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00473A8K010 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00473A8K010 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00473A8K010 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC00473A8K010 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00473A8K010 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00473A8K010 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00473A8K010 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.38■□□□□ 0.37
LINC00473A8K010 AP005435.1-201ENST00000529293 1178 ntBASIC17.38■□□□□ 0.37
LINC00473A8K010 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC00473A8K010 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00473A8K010 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00473A8K010 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC00473A8K010 AP004607.7-201ENST00000527152 1677 ntBASIC17.38■□□□□ 0.37
LINC00473A8K010 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00473A8K010 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00473A8K010 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC00473A8K010 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00473A8K010 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LINC00473A8K010 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00473A8K010 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC00473A8K010 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC00473A8K010 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00473A8K010 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00473A8K010 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00473A8K010 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00473A8K010 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00473A8K010 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.37■□□□□ 0.37
LINC00473A8K010 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00473A8K010 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00473A8K010 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00473A8K010 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.37■□□□□ 0.37
LINC00473A8K010 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00473A8K010 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms