Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TMEM88BA6NKF7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TMEM88BA6NKF7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TMEM88BA6NKF7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TMEM88BA6NKF7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC25.33■■□□□ 1.65
TMEM88BA6NKF7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TMEM88BA6NKF7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TMEM88BA6NKF7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.33■■□□□ 1.65
TMEM88BA6NKF7 DUSP8P4-201ENST00000399538 1761 ntBASIC25.33■■□□□ 1.65
TMEM88BA6NKF7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.33■■□□□ 1.65
TMEM88BA6NKF7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.33■■□□□ 1.64
TMEM88BA6NKF7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
TMEM88BA6NKF7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TMEM88BA6NKF7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
TMEM88BA6NKF7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
TMEM88BA6NKF7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC25.32■■□□□ 1.64
TMEM88BA6NKF7 TK2-213ENST00000563369 882 ntTSL 5 BASIC25.32■■□□□ 1.64
TMEM88BA6NKF7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TMEM88BA6NKF7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.32■■□□□ 1.64
TMEM88BA6NKF7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.31■■□□□ 1.64
TMEM88BA6NKF7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TMEM88BA6NKF7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TMEM88BA6NKF7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TMEM88BA6NKF7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TMEM88BA6NKF7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC25.31■■□□□ 1.64
TMEM88BA6NKF7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC25.31■■□□□ 1.64
TMEM88BA6NKF7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
TMEM88BA6NKF7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25.3■■□□□ 1.64
TMEM88BA6NKF7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TMEM88BA6NKF7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TMEM88BA6NKF7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC25.3■■□□□ 1.64
TMEM88BA6NKF7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
TMEM88BA6NKF7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TMEM88BA6NKF7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC25.3■■□□□ 1.64
TMEM88BA6NKF7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
TMEM88BA6NKF7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TMEM88BA6NKF7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.3■■□□□ 1.64
TMEM88BA6NKF7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
TMEM88BA6NKF7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TMEM88BA6NKF7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC25.29■■□□□ 1.64
TMEM88BA6NKF7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TMEM88BA6NKF7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TMEM88BA6NKF7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC25.29■■□□□ 1.64
TMEM88BA6NKF7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TMEM88BA6NKF7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TMEM88BA6NKF7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TMEM88BA6NKF7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TMEM88BA6NKF7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TMEM88BA6NKF7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TMEM88BA6NKF7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TMEM88BA6NKF7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
TMEM88BA6NKF7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TMEM88BA6NKF7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TMEM88BA6NKF7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC25.28■■□□□ 1.64
TMEM88BA6NKF7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
TMEM88BA6NKF7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.28■■□□□ 1.64
TMEM88BA6NKF7 AL162412.1-201ENST00000567129 965 ntBASIC25.28■■□□□ 1.64
TMEM88BA6NKF7 AL445228.2-201ENST00000605589 952 ntBASIC25.28■■□□□ 1.64
TMEM88BA6NKF7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TMEM88BA6NKF7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TMEM88BA6NKF7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC25.27■■□□□ 1.64
TMEM88BA6NKF7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC25.27■■□□□ 1.64
TMEM88BA6NKF7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.27■■□□□ 1.64
TMEM88BA6NKF7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.27■■□□□ 1.64
TMEM88BA6NKF7 RN7SL471P-201ENST00000580476 299 ntBASIC25.27■■□□□ 1.64
TMEM88BA6NKF7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC25.27■■□□□ 1.64
TMEM88BA6NKF7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMEM88BA6NKF7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
TMEM88BA6NKF7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC25.26■■□□□ 1.63
TMEM88BA6NKF7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC25.26■■□□□ 1.63
TMEM88BA6NKF7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC25.26■■□□□ 1.63
TMEM88BA6NKF7 LSM12P1-201ENST00000411836 588 ntBASIC25.26■■□□□ 1.63
TMEM88BA6NKF7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMEM88BA6NKF7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC25.26■■□□□ 1.63
TMEM88BA6NKF7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TMEM88BA6NKF7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
TMEM88BA6NKF7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TMEM88BA6NKF7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
TMEM88BA6NKF7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC25.26■■□□□ 1.63
TMEM88BA6NKF7 AC079630.1-202ENST00000618127 1840 ntBASIC25.26■■□□□ 1.63
TMEM88BA6NKF7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TMEM88BA6NKF7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TMEM88BA6NKF7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TMEM88BA6NKF7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TMEM88BA6NKF7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TMEM88BA6NKF7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TMEM88BA6NKF7 EEF1DP3-203ENST00000566025 782 ntBASIC25.25■■□□□ 1.63
TMEM88BA6NKF7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
TMEM88BA6NKF7 AC133561.5-201ENST00000635547 218 ntBASIC25.25■■□□□ 1.63
TMEM88BA6NKF7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TMEM88BA6NKF7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TMEM88BA6NKF7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
TMEM88BA6NKF7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TMEM88BA6NKF7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
TMEM88BA6NKF7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC25.24■■□□□ 1.63
TMEM88BA6NKF7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
TMEM88BA6NKF7 KRT17P3-201ENST00000420566 1262 ntBASIC25.24■■□□□ 1.63
TMEM88BA6NKF7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TMEM88BA6NKF7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC25.24■■□□□ 1.63
TMEM88BA6NKF7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms