Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 AL031602.1-201ENST00000633169 911 ntBASIC20.09■□□□□ 0.81
PRAMEF25A6NGN4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAMEF25A6NGN4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAMEF25A6NGN4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAMEF25A6NGN4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAMEF25A6NGN4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRAMEF25A6NGN4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRAMEF25A6NGN4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRAMEF25A6NGN4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.08■□□□□ 0.81
PRAMEF25A6NGN4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PRAMEF25A6NGN4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRAMEF25A6NGN4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.08■□□□□ 0.81
PRAMEF25A6NGN4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
PRAMEF25A6NGN4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.08■□□□□ 0.81
PRAMEF25A6NGN4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.08■□□□□ 0.81
PRAMEF25A6NGN4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PRAMEF25A6NGN4 AC068587.7-201ENST00000641602 218 ntBASIC20.08■□□□□ 0.81
PRAMEF25A6NGN4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
PRAMEF25A6NGN4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRAMEF25A6NGN4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRAMEF25A6NGN4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 AC244015.2-201ENST00000616358 1861 ntBASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 AC105265.2-201ENST00000467189 838 ntBASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 IGHV3-19-201ENST00000521488 291 ntBASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PRAMEF25A6NGN4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.06■□□□□ 0.8
PRAMEF25A6NGN4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PRAMEF25A6NGN4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PRAMEF25A6NGN4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEF25A6NGN4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEF25A6NGN4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PRAMEF25A6NGN4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PRAMEF25A6NGN4 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.06■□□□□ 0.8
PRAMEF25A6NGN4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEF25A6NGN4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEF25A6NGN4 AC087239.1-201ENST00000622671 572 ntBASIC20.06■□□□□ 0.8
PRAMEF25A6NGN4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.05■□□□□ 0.8
PRAMEF25A6NGN4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF25A6NGN4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF25A6NGN4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF25A6NGN4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF25A6NGN4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF25A6NGN4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.05■□□□□ 0.8
PRAMEF25A6NGN4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF25A6NGN4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PRAMEF25A6NGN4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF25A6NGN4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF25A6NGN4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PRAMEF25A6NGN4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF25A6NGN4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF25A6NGN4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF25A6NGN4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF25A6NGN4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF25A6NGN4 TSPY26P-201ENST00000476365 1326 ntBASIC20.04■□□□□ 0.8
PRAMEF25A6NGN4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF25A6NGN4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
PRAMEF25A6NGN4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF25A6NGN4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF25A6NGN4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.04■□□□□ 0.8
PRAMEF25A6NGN4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
PRAMEF25A6NGN4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF25A6NGN4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.04■□□□□ 0.8
PRAMEF25A6NGN4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF25A6NGN4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF25A6NGN4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.04■□□□□ 0.8
PRAMEF25A6NGN4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 AC026471.6-201ENST00000622954 1905 ntBASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.03■□□□□ 0.8
PRAMEF25A6NGN4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF25A6NGN4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms