Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHISA3A0PJX4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHISA3A0PJX4 AL391422.3-201ENST00000603791 2761 ntBASIC18.68■□□□□ 0.58
SHISA3A0PJX4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHISA3A0PJX4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHISA3A0PJX4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHISA3A0PJX4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHISA3A0PJX4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHISA3A0PJX4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHISA3A0PJX4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.68■□□□□ 0.58
SHISA3A0PJX4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHISA3A0PJX4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHISA3A0PJX4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SHISA3A0PJX4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHISA3A0PJX4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHISA3A0PJX4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SHISA3A0PJX4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
SHISA3A0PJX4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHISA3A0PJX4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SHISA3A0PJX4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHISA3A0PJX4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHISA3A0PJX4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SHISA3A0PJX4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHISA3A0PJX4 MIR4508-201ENST00000584178 70 ntBASIC18.67■□□□□ 0.58
SHISA3A0PJX4 AC137630.3-201ENST00000607245 391 ntBASIC18.67■□□□□ 0.58
SHISA3A0PJX4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHISA3A0PJX4 OXCT2P1-201ENST00000447263 1535 ntBASIC18.67■□□□□ 0.58
SHISA3A0PJX4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.67■□□□□ 0.58
SHISA3A0PJX4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SHISA3A0PJX4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SHISA3A0PJX4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHISA3A0PJX4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.67■□□□□ 0.58
SHISA3A0PJX4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SHISA3A0PJX4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHISA3A0PJX4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA3A0PJX4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA3A0PJX4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA3A0PJX4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.66■□□□□ 0.58
SHISA3A0PJX4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA3A0PJX4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA3A0PJX4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA3A0PJX4 ATP5G2P3-201ENST00000429083 425 ntBASIC18.66■□□□□ 0.58
SHISA3A0PJX4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA3A0PJX4 AC079089.2-201ENST00000531211 1277 ntBASIC18.66■□□□□ 0.58
SHISA3A0PJX4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SHISA3A0PJX4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.66■□□□□ 0.58
SHISA3A0PJX4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA3A0PJX4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.66■□□□□ 0.58
SHISA3A0PJX4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SHISA3A0PJX4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHISA3A0PJX4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SHISA3A0PJX4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.65■□□□□ 0.58
SHISA3A0PJX4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SHISA3A0PJX4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.65■□□□□ 0.58
SHISA3A0PJX4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
SHISA3A0PJX4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SHISA3A0PJX4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHISA3A0PJX4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
SHISA3A0PJX4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHISA3A0PJX4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHISA3A0PJX4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.65■□□□□ 0.58
SHISA3A0PJX4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHISA3A0PJX4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.65■□□□□ 0.58
SHISA3A0PJX4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHISA3A0PJX4 AFG3L1P-217ENST00000557444 2447 ntBASIC18.65■□□□□ 0.58
SHISA3A0PJX4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHISA3A0PJX4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHISA3A0PJX4 PCDHAC2-203ENST00000615316 3011 ntBASIC18.65■□□□□ 0.58
SHISA3A0PJX4 AC073314.1-201ENST00000568729 2216 ntBASIC18.65■□□□□ 0.58
SHISA3A0PJX4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SHISA3A0PJX4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SHISA3A0PJX4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
SHISA3A0PJX4 AP005212.1-201ENST00000581547 1997 ntBASIC18.64■□□□□ 0.58
SHISA3A0PJX4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.64■□□□□ 0.57
SHISA3A0PJX4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA3A0PJX4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA3A0PJX4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.64■□□□□ 0.57
SHISA3A0PJX4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA3A0PJX4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA3A0PJX4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.64■□□□□ 0.57
SHISA3A0PJX4 AC103834.1-201ENST00000520383 144 ntBASIC18.64■□□□□ 0.57
SHISA3A0PJX4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.64■□□□□ 0.57
SHISA3A0PJX4 NTF6A-201ENST00000591175 560 ntBASIC18.64■□□□□ 0.57
SHISA3A0PJX4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA3A0PJX4 AL031602.1-201ENST00000633169 911 ntBASIC18.64■□□□□ 0.57
SHISA3A0PJX4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA3A0PJX4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
SHISA3A0PJX4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA3A0PJX4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA3A0PJX4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA3A0PJX4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA3A0PJX4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.64■□□□□ 0.57
SHISA3A0PJX4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHISA3A0PJX4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHISA3A0PJX4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms