Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 AC133552.2-202ENST00000575694 574 ntBASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAV17A0A0B4J275 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV17A0A0B4J275 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV17A0A0B4J275 CD99P1-205ENST00000527459 561 ntBASIC19.44■□□□□ 0.7
TRAV17A0A0B4J275 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAV17A0A0B4J275 AC120498.10-201ENST00000621827 505 ntBASIC19.44■□□□□ 0.7
TRAV17A0A0B4J275 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV17A0A0B4J275 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV17A0A0B4J275 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV17A0A0B4J275 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAV17A0A0B4J275 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 ABHD17AP1-201ENST00000358206 933 ntBASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 GUSBP6-202ENST00000438529 1198 ntBASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 TERF1P5-201ENST00000477545 1207 ntBASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV17A0A0B4J275 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 AC105036.2-201ENST00000569468 176 ntBASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 AC008175.2-201ENST00000612840 297 ntBASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV17A0A0B4J275 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 AC137767.1-201ENST00000602918 1920 ntBASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV17A0A0B4J275 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV17A0A0B4J275 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV17A0A0B4J275 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV17A0A0B4J275 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV17A0A0B4J275 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV17A0A0B4J275 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV17A0A0B4J275 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV17A0A0B4J275 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV17A0A0B4J275 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV17A0A0B4J275 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV17A0A0B4J275 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV17A0A0B4J275 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.4■□□□□ 0.7
TRAV17A0A0B4J275 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV17A0A0B4J275 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV17A0A0B4J275 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV17A0A0B4J275 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV17A0A0B4J275 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV17A0A0B4J275 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV17A0A0B4J275 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV17A0A0B4J275 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRAV17A0A0B4J275 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms