Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC010343.1-201ENST00000467270 629 ntBASIC12.29□□□□□ -0.44
MTHFRP42898 RN7SL553P-201ENST00000482215 298 ntBASIC12.29□□□□□ -0.44
MTHFRP42898 CTSC-206ENST00000529974 747 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 AL512310.4-201ENST00000548456 411 ntBASIC12.29□□□□□ -0.44
MTHFRP42898 LINC00929-202ENST00000556159 1169 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 CNIH1-207ENST00000557690 838 ntTSL 3 BASIC12.29□□□□□ -0.44
MTHFRP42898 AC005154.5-201ENST00000583191 368 ntTSL 2 BASIC12.29□□□□□ -0.44
MTHFRP42898 AC145207.4-201ENST00000583521 450 ntTSL 5 BASIC12.29□□□□□ -0.44
MTHFRP42898 AC067819.1-201ENST00000583846 154 ntBASIC12.29□□□□□ -0.44
MTHFRP42898 AC005154.1-217ENST00000584199 581 ntTSL 4 BASIC12.29□□□□□ -0.44
MTHFRP42898 HNRNPMP2-201ENST00000596369 599 ntBASIC12.29□□□□□ -0.44
MTHFRP42898 AL772337.4-201ENST00000610707 745 ntBASIC12.29□□□□□ -0.44
MTHFRP42898 SOX9-AS1-219ENST00000630770 961 ntTSL 5 BASIC12.29□□□□□ -0.44
MTHFRP42898 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
MTHFRP42898 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 CDKL2-201ENST00000307465 2565 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
MTHFRP42898 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
MTHFRP42898 CUL7-201ENST00000265348 5254 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
MTHFRP42898 LINC01515-201ENST00000433152 1339 ntTSL 5 BASIC12.29□□□□□ -0.44
MTHFRP42898 ZNF625-202ENST00000439556 1322 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
MTHFRP42898 LINC00852-201ENST00000475197 1328 ntBASIC12.29□□□□□ -0.44
MTHFRP42898 SPATA13-205ENST00000409126 2111 ntTSL 2 BASIC12.29□□□□□ -0.44
MTHFRP42898 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC12.29□□□□□ -0.44
MTHFRP42898 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
MTHFRP42898 DCAF6-204ENST00000432587 3522 ntTSL 2 BASIC12.29□□□□□ -0.44
MTHFRP42898 CCDC181-201ENST00000367805 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 SPOP-205ENST00000503676 1932 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
MTHFRP42898 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC12.29□□□□□ -0.44
MTHFRP42898 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
MTHFRP42898 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
MTHFRP42898 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
MTHFRP42898 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
MTHFRP42898 APTX-215ENST00000468275 1455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 SLC35F4-201ENST00000339762 1779 ntTSL 5 BASIC12.28□□□□□ -0.44
MTHFRP42898 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC12.28□□□□□ -0.44
MTHFRP42898 TMCC2-208ENST00000545499 3339 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
MTHFRP42898 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 SHC4-201ENST00000332408 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 LRSAM1-202ENST00000323301 3376 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
MTHFRP42898 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
MTHFRP42898 TSPAN6-201ENST00000373020 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 C12orf57-201ENST00000229281 560 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 CMTM2-201ENST00000268595 1054 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 MTRF1LP1-201ENST00000321235 679 ntBASIC12.28□□□□□ -0.44
MTHFRP42898 TP53-202ENST00000359597 1152 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 SLC25A14-203ENST00000361980 969 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 HIST1H2BPS1-201ENST00000369177 310 ntBASIC12.28□□□□□ -0.44
MTHFRP42898 AC008443.1-204ENST00000417281 629 ntTSL 3 BASIC12.28□□□□□ -0.44
MTHFRP42898 MT1XP1-201ENST00000421314 186 ntBASIC12.28□□□□□ -0.44
MTHFRP42898 GRTP1-AS1-202ENST00000423246 465 ntTSL 5 BASIC12.28□□□□□ -0.44
MTHFRP42898 AC079988.1-201ENST00000432984 544 ntTSL 4 BASIC12.28□□□□□ -0.44
MTHFRP42898 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC12.28□□□□□ -0.44
MTHFRP42898 RN7SL658P-201ENST00000463595 303 ntBASIC12.28□□□□□ -0.44
MTHFRP42898 DLEU1-208ENST00000468168 982 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 RN7SL704P-201ENST00000478699 274 ntBASIC12.28□□□□□ -0.44
MTHFRP42898 LIFR-AS1-201ENST00000500733 3803 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 FAM83A-AS1-201ENST00000517519 1158 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 IGHV1-17-201ENST00000520119 334 ntBASIC12.28□□□□□ -0.44
MTHFRP42898 CYP4F44P-201ENST00000520423 412 ntBASIC12.28□□□□□ -0.44
MTHFRP42898 NXF1-208ENST00000531131 1023 ntTSL 2 BASIC12.28□□□□□ -0.44
MTHFRP42898 C12orf57-202ENST00000537087 662 ntTSL 2 BASIC12.28□□□□□ -0.44
MTHFRP42898 AC084879.1-203ENST00000550470 1257 ntTSL 5 BASIC12.28□□□□□ -0.44
MTHFRP42898 COPZ1-214ENST00000552218 797 ntTSL 5 BASIC12.28□□□□□ -0.44
MTHFRP42898 IGHV1OR15-2-201ENST00000558824 353 ntBASIC12.28□□□□□ -0.44
MTHFRP42898 AC002306.1-201ENST00000559614 937 ntTSL 3 BASIC12.28□□□□□ -0.44
MTHFRP42898 AC011773.4-201ENST00000562577 487 ntTSL 2 BASIC12.28□□□□□ -0.44
MTHFRP42898 HNRNPA3P11-201ENST00000564298 934 ntBASIC12.28□□□□□ -0.44
MTHFRP42898 AC010551.1-201ENST00000568458 469 ntTSL 4 BASIC12.28□□□□□ -0.44
MTHFRP42898 MBP-234ENST00000578193 578 ntTSL 5 BASIC12.28□□□□□ -0.44
MTHFRP42898 RN7SL275P-201ENST00000582762 335 ntBASIC12.28□□□□□ -0.44
MTHFRP42898 AC010624.3-202ENST00000599410 562 ntTSL 4 BASIC12.28□□□□□ -0.44
MTHFRP42898 AC008750.4-201ENST00000600974 219 ntTSL 3 BASIC12.28□□□□□ -0.44
MTHFRP42898 AC007389.1-201ENST00000606978 1117 ntTSL 5 BASIC12.28□□□□□ -0.44
MTHFRP42898 AC131055.2-201ENST00000610586 248 ntBASIC12.28□□□□□ -0.44
MTHFRP42898 AL158850.2-204ENST00000616537 1188 ntTSL 5 BASIC12.28□□□□□ -0.44
MTHFRP42898 Metazoa_SRP.49-201ENST00000616811 283 ntBASIC12.28□□□□□ -0.44
MTHFRP42898 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 RAVER1-201ENST00000293677 3595 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
MTHFRP42898 EEF2KMT-202ENST00000458008 2268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 TTC17-202ENST00000299240 3648 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 KC6-207ENST00000600644 2311 ntTSL 3 BASIC12.28□□□□□ -0.44
MTHFRP42898 ALDH7A1-224ENST00000636743 2332 ntTSL 5 BASIC12.28□□□□□ -0.44
MTHFRP42898 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms