Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
DDX49Q9Y6V7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.63■■□□□ 1.69
DDX49Q9Y6V7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
DDX49Q9Y6V7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC25.63■■□□□ 1.69
DDX49Q9Y6V7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
DDX49Q9Y6V7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
DDX49Q9Y6V7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX49Q9Y6V7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.63■■□□□ 1.69
DDX49Q9Y6V7 MIR6821-201ENST00000617625 74 ntBASIC25.63■■□□□ 1.69
DDX49Q9Y6V7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
DDX49Q9Y6V7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX49Q9Y6V7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
DDX49Q9Y6V7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX49Q9Y6V7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX49Q9Y6V7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
DDX49Q9Y6V7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX49Q9Y6V7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX49Q9Y6V7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX49Q9Y6V7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
DDX49Q9Y6V7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.62■■□□□ 1.69
DDX49Q9Y6V7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX49Q9Y6V7 AC233992.3-201ENST00000607491 485 ntBASIC25.62■■□□□ 1.69
DDX49Q9Y6V7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.62■■□□□ 1.69
DDX49Q9Y6V7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX49Q9Y6V7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
DDX49Q9Y6V7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX49Q9Y6V7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.62■■□□□ 1.69
DDX49Q9Y6V7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC25.62■■□□□ 1.69
DDX49Q9Y6V7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX49Q9Y6V7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
DDX49Q9Y6V7 AC087742.1-201ENST00000575880 1738 ntBASIC25.61■■□□□ 1.69
DDX49Q9Y6V7 IRS3P-201ENST00000223076 1006 ntBASIC25.61■■□□□ 1.69
DDX49Q9Y6V7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.61■■□□□ 1.69
DDX49Q9Y6V7 AC097381.1-201ENST00000429019 1296 ntBASIC25.61■■□□□ 1.69
DDX49Q9Y6V7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.61■■□□□ 1.69
DDX49Q9Y6V7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.61■■□□□ 1.69
DDX49Q9Y6V7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX49Q9Y6V7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.61■■□□□ 1.69
DDX49Q9Y6V7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.61■■□□□ 1.69
DDX49Q9Y6V7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX49Q9Y6V7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.6■■□□□ 1.69
DDX49Q9Y6V7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.6■■□□□ 1.69
DDX49Q9Y6V7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
DDX49Q9Y6V7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
DDX49Q9Y6V7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.6■■□□□ 1.69
DDX49Q9Y6V7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.6■■□□□ 1.69
DDX49Q9Y6V7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
DDX49Q9Y6V7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
DDX49Q9Y6V7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX49Q9Y6V7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.59■■□□□ 1.69
DDX49Q9Y6V7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
DDX49Q9Y6V7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX49Q9Y6V7 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.59■■□□□ 1.69
DDX49Q9Y6V7 SLC47A1P1-202ENST00000449666 945 ntBASIC25.59■■□□□ 1.69
DDX49Q9Y6V7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.59■■□□□ 1.69
DDX49Q9Y6V7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.59■■□□□ 1.69
DDX49Q9Y6V7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.59■■□□□ 1.69
DDX49Q9Y6V7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.59■■□□□ 1.69
DDX49Q9Y6V7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
DDX49Q9Y6V7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC25.59■■□□□ 1.69
DDX49Q9Y6V7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX49Q9Y6V7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
DDX49Q9Y6V7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX49Q9Y6V7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.59■■□□□ 1.69
DDX49Q9Y6V7 FAM99A-202ENST00000538190 1989 ntBASIC25.58■■□□□ 1.69
DDX49Q9Y6V7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX49Q9Y6V7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC25.58■■□□□ 1.69
DDX49Q9Y6V7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX49Q9Y6V7 BX842568.3-201ENST00000418104 571 ntBASIC25.58■■□□□ 1.69
DDX49Q9Y6V7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.58■■□□□ 1.69
DDX49Q9Y6V7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.58■■□□□ 1.69
DDX49Q9Y6V7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
DDX49Q9Y6V7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.58■■□□□ 1.69
DDX49Q9Y6V7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX49Q9Y6V7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
DDX49Q9Y6V7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
DDX49Q9Y6V7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX49Q9Y6V7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX49Q9Y6V7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX49Q9Y6V7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX49Q9Y6V7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
DDX49Q9Y6V7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.57■■□□□ 1.68
DDX49Q9Y6V7 AL162430.1-201ENST00000480705 870 ntBASIC25.57■■□□□ 1.68
DDX49Q9Y6V7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
DDX49Q9Y6V7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX49Q9Y6V7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX49Q9Y6V7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX49Q9Y6V7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
DDX49Q9Y6V7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX49Q9Y6V7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC25.57■■□□□ 1.68
DDX49Q9Y6V7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX49Q9Y6V7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX49Q9Y6V7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
DDX49Q9Y6V7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX49Q9Y6V7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX49Q9Y6V7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX49Q9Y6V7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX49Q9Y6V7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.55■■□□□ 1.68
DDX49Q9Y6V7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.55■■□□□ 1.68
DDX49Q9Y6V7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms