Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 LINC00526-201ENST00000581067 1875 ntBASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 YBX1P1-201ENST00000445822 960 ntBASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 AC242852.2-201ENST00000615738 1807 ntBASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPH3AQ9Y2J0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPH3AQ9Y2J0 OR7E47P-201ENST00000546390 1422 ntBASIC19.59■□□□□ 0.73
RPH3AQ9Y2J0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPH3AQ9Y2J0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPH3AQ9Y2J0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPH3AQ9Y2J0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPH3AQ9Y2J0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPH3AQ9Y2J0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.59■□□□□ 0.73
RPH3AQ9Y2J0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.59■□□□□ 0.73
RPH3AQ9Y2J0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.59■□□□□ 0.73
RPH3AQ9Y2J0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPH3AQ9Y2J0 BX005040.4-201ENST00000637145 1518 ntBASIC19.59■□□□□ 0.73
RPH3AQ9Y2J0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPH3AQ9Y2J0 AC139530.1-201ENST00000575312 1977 ntBASIC19.59■□□□□ 0.73
RPH3AQ9Y2J0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RPH3AQ9Y2J0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPH3AQ9Y2J0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.58■□□□□ 0.73
RPH3AQ9Y2J0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
RPH3AQ9Y2J0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.58■□□□□ 0.73
RPH3AQ9Y2J0 AC080038.3-201ENST00000623346 1952 ntBASIC19.58■□□□□ 0.73
RPH3AQ9Y2J0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPH3AQ9Y2J0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RPH3AQ9Y2J0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RPH3AQ9Y2J0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.58■□□□□ 0.72
RPH3AQ9Y2J0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPH3AQ9Y2J0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPH3AQ9Y2J0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPH3AQ9Y2J0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RPH3AQ9Y2J0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPH3AQ9Y2J0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RPH3AQ9Y2J0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPH3AQ9Y2J0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPH3AQ9Y2J0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPH3AQ9Y2J0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RPH3AQ9Y2J0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.57■□□□□ 0.72
RPH3AQ9Y2J0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPH3AQ9Y2J0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPH3AQ9Y2J0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPH3AQ9Y2J0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPH3AQ9Y2J0 ECEL1P1-201ENST00000373592 1742 ntBASIC19.56■□□□□ 0.72
RPH3AQ9Y2J0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPH3AQ9Y2J0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPH3AQ9Y2J0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPH3AQ9Y2J0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RPH3AQ9Y2J0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
RPH3AQ9Y2J0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.56■□□□□ 0.72
RPH3AQ9Y2J0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPH3AQ9Y2J0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPH3AQ9Y2J0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPH3AQ9Y2J0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPH3AQ9Y2J0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPH3AQ9Y2J0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RPH3AQ9Y2J0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPH3AQ9Y2J0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.56■□□□□ 0.72
RPH3AQ9Y2J0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 AP004607.7-201ENST00000527152 1677 ntBASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 LINC02228-203ENST00000641970 1355 ntBASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPH3AQ9Y2J0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms