Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC010542.4-201ENST00000563151 1910 ntBASIC20.12■□□□□ 0.81
RNF6Q9Y252 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RNF6Q9Y252 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF6Q9Y252 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF6Q9Y252 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF6Q9Y252 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF6Q9Y252 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF6Q9Y252 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF6Q9Y252 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF6Q9Y252 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
RNF6Q9Y252 AC009086.3-201ENST00000623486 1008 ntBASIC20.12■□□□□ 0.81
RNF6Q9Y252 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF6Q9Y252 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF6Q9Y252 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RNF6Q9Y252 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF6Q9Y252 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF6Q9Y252 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF6Q9Y252 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RNF6Q9Y252 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF6Q9Y252 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF6Q9Y252 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RNF6Q9Y252 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF6Q9Y252 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF6Q9Y252 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF6Q9Y252 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF6Q9Y252 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF6Q9Y252 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF6Q9Y252 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF6Q9Y252 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RNF6Q9Y252 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF6Q9Y252 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
RNF6Q9Y252 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF6Q9Y252 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF6Q9Y252 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF6Q9Y252 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF6Q9Y252 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF6Q9Y252 AL162430.1-201ENST00000480705 870 ntBASIC20.1■□□□□ 0.81
RNF6Q9Y252 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF6Q9Y252 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF6Q9Y252 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF6Q9Y252 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF6Q9Y252 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RNF6Q9Y252 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF6Q9Y252 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF6Q9Y252 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF6Q9Y252 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF6Q9Y252 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF6Q9Y252 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF6Q9Y252 MIR3181-201ENST00000578512 73 ntBASIC20.09■□□□□ 0.81
RNF6Q9Y252 AC233992.3-201ENST00000607491 485 ntBASIC20.09■□□□□ 0.81
RNF6Q9Y252 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.09■□□□□ 0.81
RNF6Q9Y252 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF6Q9Y252 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RNF6Q9Y252 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF6Q9Y252 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF6Q9Y252 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.09■□□□□ 0.81
RNF6Q9Y252 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF6Q9Y252 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF6Q9Y252 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF6Q9Y252 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF6Q9Y252 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RNF6Q9Y252 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.08■□□□□ 0.81
RNF6Q9Y252 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RNF6Q9Y252 BX842568.3-201ENST00000418104 571 ntBASIC20.08■□□□□ 0.81
RNF6Q9Y252 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.08■□□□□ 0.81
RNF6Q9Y252 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RNF6Q9Y252 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.08■□□□□ 0.8
RNF6Q9Y252 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.08■□□□□ 0.8
RNF6Q9Y252 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RNF6Q9Y252 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF6Q9Y252 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF6Q9Y252 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF6Q9Y252 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF6Q9Y252 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.08■□□□□ 0.8
RNF6Q9Y252 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RNF6Q9Y252 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF6Q9Y252 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RNF6Q9Y252 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF6Q9Y252 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF6Q9Y252 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF6Q9Y252 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF6Q9Y252 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF6Q9Y252 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF6Q9Y252 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF6Q9Y252 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF6Q9Y252 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF6Q9Y252 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF6Q9Y252 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF6Q9Y252 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF6Q9Y252 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF6Q9Y252 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF6Q9Y252 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF6Q9Y252 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.06■□□□□ 0.8
RNF6Q9Y252 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF6Q9Y252 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF6Q9Y252 AC005229.4-201ENST00000610085 2198 ntBASIC20.06■□□□□ 0.8
RNF6Q9Y252 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF6Q9Y252 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF6Q9Y252 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RNF6Q9Y252 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms