Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC33.43■■■□□ 2.94
CDK11AQ9UQ88 AC053503.5-201ENST00000601508 636 ntBASIC33.43■■■□□ 2.94
CDK11AQ9UQ88 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC33.43■■■□□ 2.94
CDK11AQ9UQ88 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
CDK11AQ9UQ88 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC33.43■■■□□ 2.94
CDK11AQ9UQ88 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC33.43■■■□□ 2.94
CDK11AQ9UQ88 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
CDK11AQ9UQ88 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CDK11AQ9UQ88 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
CDK11AQ9UQ88 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC33.42■■■□□ 2.94
CDK11AQ9UQ88 MIR4651-201ENST00000582622 73 ntBASIC33.42■■■□□ 2.94
CDK11AQ9UQ88 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC33.42■■■□□ 2.94
CDK11AQ9UQ88 AC066615.1-201ENST00000640911 628 ntBASIC33.42■■■□□ 2.94
CDK11AQ9UQ88 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC33.42■■■□□ 2.94
CDK11AQ9UQ88 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CDK11AQ9UQ88 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC33.41■■■□□ 2.94
CDK11AQ9UQ88 AC007322.4-201ENST00000509611 723 ntBASIC33.41■■■□□ 2.94
CDK11AQ9UQ88 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC33.41■■■□□ 2.94
CDK11AQ9UQ88 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CDK11AQ9UQ88 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CDK11AQ9UQ88 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
CDK11AQ9UQ88 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC33.41■■■□□ 2.94
CDK11AQ9UQ88 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC33.41■■■□□ 2.94
CDK11AQ9UQ88 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
CDK11AQ9UQ88 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CDK11AQ9UQ88 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CDK11AQ9UQ88 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC33.4■■■□□ 2.94
CDK11AQ9UQ88 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC33.4■■■□□ 2.94
CDK11AQ9UQ88 LINC00526-201ENST00000581067 1875 ntBASIC33.4■■■□□ 2.94
CDK11AQ9UQ88 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC33.4■■■□□ 2.94
CDK11AQ9UQ88 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC33.4■■■□□ 2.94
CDK11AQ9UQ88 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
CDK11AQ9UQ88 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC33.4■■■□□ 2.94
CDK11AQ9UQ88 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
CDK11AQ9UQ88 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC33.4■■■□□ 2.94
CDK11AQ9UQ88 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC33.4■■■□□ 2.94
CDK11AQ9UQ88 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
CDK11AQ9UQ88 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC33.39■■■□□ 2.94
CDK11AQ9UQ88 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC33.39■■■□□ 2.94
CDK11AQ9UQ88 AC068338.2-201ENST00000563278 1430 ntBASIC33.39■■■□□ 2.94
CDK11AQ9UQ88 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
CDK11AQ9UQ88 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC33.39■■■□□ 2.94
CDK11AQ9UQ88 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
CDK11AQ9UQ88 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
CDK11AQ9UQ88 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC33.39■■■□□ 2.94
CDK11AQ9UQ88 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
CDK11AQ9UQ88 NAA20-201ENST00000310450 920 ntTSL 2 BASIC33.38■■■□□ 2.93
CDK11AQ9UQ88 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
CDK11AQ9UQ88 BET1L-204ENST00000410108 637 ntTSL 3 BASIC33.38■■■□□ 2.93
CDK11AQ9UQ88 MIR4758-201ENST00000577688 71 ntBASIC33.38■■■□□ 2.93
CDK11AQ9UQ88 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
CDK11AQ9UQ88 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC33.38■■■□□ 2.93
CDK11AQ9UQ88 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC33.38■■■□□ 2.93
CDK11AQ9UQ88 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC33.37■■■□□ 2.93
CDK11AQ9UQ88 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
CDK11AQ9UQ88 AC098934.4-201ENST00000564127 592 ntBASIC33.37■■■□□ 2.93
CDK11AQ9UQ88 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
CDK11AQ9UQ88 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC33.37■■■□□ 2.93
CDK11AQ9UQ88 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
CDK11AQ9UQ88 AP006587.3-201ENST00000525742 1516 ntBASIC33.37■■■□□ 2.93
CDK11AQ9UQ88 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC33.37■■■□□ 2.93
CDK11AQ9UQ88 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
CDK11AQ9UQ88 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
CDK11AQ9UQ88 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
CDK11AQ9UQ88 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC33.36■■■□□ 2.93
CDK11AQ9UQ88 CYP2T1P-201ENST00000432607 1285 ntBASIC33.36■■■□□ 2.93
CDK11AQ9UQ88 FAM201B-201ENST00000458407 597 ntBASIC33.36■■■□□ 2.93
CDK11AQ9UQ88 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC33.36■■■□□ 2.93
CDK11AQ9UQ88 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC33.36■■■□□ 2.93
CDK11AQ9UQ88 TBCB-214ENST00000629269 413 ntTSL 5 BASIC33.36■■■□□ 2.93
CDK11AQ9UQ88 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC33.36■■■□□ 2.93
CDK11AQ9UQ88 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC33.36■■■□□ 2.93
CDK11AQ9UQ88 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC33.36■■■□□ 2.93
CDK11AQ9UQ88 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC33.36■■■□□ 2.93
CDK11AQ9UQ88 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
CDK11AQ9UQ88 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC33.36■■■□□ 2.93
CDK11AQ9UQ88 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC33.35■■■□□ 2.93
CDK11AQ9UQ88 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
CDK11AQ9UQ88 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC33.35■■■□□ 2.93
CDK11AQ9UQ88 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC33.35■■■□□ 2.93
CDK11AQ9UQ88 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
CDK11AQ9UQ88 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
CDK11AQ9UQ88 BMP1-204ENST00000397814 836 ntTSL 4 BASIC33.35■■■□□ 2.93
CDK11AQ9UQ88 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC33.35■■■□□ 2.93
CDK11AQ9UQ88 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC33.35■■■□□ 2.93
CDK11AQ9UQ88 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
CDK11AQ9UQ88 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC33.35■■■□□ 2.93
CDK11AQ9UQ88 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
CDK11AQ9UQ88 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
CDK11AQ9UQ88 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC33.34■■■□□ 2.93
CDK11AQ9UQ88 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
CDK11AQ9UQ88 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC33.34■■■□□ 2.93
CDK11AQ9UQ88 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC33.34■■■□□ 2.93
CDK11AQ9UQ88 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
CDK11AQ9UQ88 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
CDK11AQ9UQ88 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
CDK11AQ9UQ88 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
CDK11AQ9UQ88 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
CDK11AQ9UQ88 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC33.33■■■□□ 2.93
CDK11AQ9UQ88 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms