Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
ZC3H4Q9UPT8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC26.24■■□□□ 1.79
ZC3H4Q9UPT8 AP003097.1-201ENST00000530657 1135 ntBASIC26.24■■□□□ 1.79
ZC3H4Q9UPT8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.24■■□□□ 1.79
ZC3H4Q9UPT8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC26.24■■□□□ 1.79
ZC3H4Q9UPT8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC26.24■■□□□ 1.79
ZC3H4Q9UPT8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ZC3H4Q9UPT8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ZC3H4Q9UPT8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ZC3H4Q9UPT8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ZC3H4Q9UPT8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
ZC3H4Q9UPT8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.23■■□□□ 1.79
ZC3H4Q9UPT8 AC093323.1-202ENST00000635031 2045 ntBASIC26.23■■□□□ 1.79
ZC3H4Q9UPT8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
ZC3H4Q9UPT8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
ZC3H4Q9UPT8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.23■■□□□ 1.79
ZC3H4Q9UPT8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
ZC3H4Q9UPT8 ECEL1P3-201ENST00000427961 737 ntBASIC26.23■■□□□ 1.79
ZC3H4Q9UPT8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ZC3H4Q9UPT8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC26.23■■□□□ 1.79
ZC3H4Q9UPT8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC26.23■■□□□ 1.79
ZC3H4Q9UPT8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ZC3H4Q9UPT8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ZC3H4Q9UPT8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ZC3H4Q9UPT8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ZC3H4Q9UPT8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC26.22■■□□□ 1.79
ZC3H4Q9UPT8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
ZC3H4Q9UPT8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.22■■□□□ 1.79
ZC3H4Q9UPT8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.22■■□□□ 1.79
ZC3H4Q9UPT8 MIR4497-201ENST00000583208 89 ntBASIC26.22■■□□□ 1.79
ZC3H4Q9UPT8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC26.22■■□□□ 1.79
ZC3H4Q9UPT8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC26.22■■□□□ 1.79
ZC3H4Q9UPT8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ZC3H4Q9UPT8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.22■■□□□ 1.79
ZC3H4Q9UPT8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ZC3H4Q9UPT8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ZC3H4Q9UPT8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ZC3H4Q9UPT8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ZC3H4Q9UPT8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.21■■□□□ 1.79
ZC3H4Q9UPT8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ZC3H4Q9UPT8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ZC3H4Q9UPT8 FXN-202ENST00000396364 980 ntTSL 5 BASIC26.21■■□□□ 1.79
ZC3H4Q9UPT8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC26.21■■□□□ 1.79
ZC3H4Q9UPT8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
ZC3H4Q9UPT8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ZC3H4Q9UPT8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ZC3H4Q9UPT8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ZC3H4Q9UPT8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.21■■□□□ 1.79
ZC3H4Q9UPT8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ZC3H4Q9UPT8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
ZC3H4Q9UPT8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ZC3H4Q9UPT8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ZC3H4Q9UPT8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
ZC3H4Q9UPT8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ZC3H4Q9UPT8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ZC3H4Q9UPT8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
ZC3H4Q9UPT8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC26.2■■□□□ 1.79
ZC3H4Q9UPT8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ZC3H4Q9UPT8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
ZC3H4Q9UPT8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.2■■□□□ 1.79
ZC3H4Q9UPT8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC26.2■■□□□ 1.79
ZC3H4Q9UPT8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
ZC3H4Q9UPT8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC26.2■■□□□ 1.79
ZC3H4Q9UPT8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
ZC3H4Q9UPT8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ZC3H4Q9UPT8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ZC3H4Q9UPT8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ZC3H4Q9UPT8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC26.19■■□□□ 1.78
ZC3H4Q9UPT8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC26.19■■□□□ 1.78
ZC3H4Q9UPT8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
ZC3H4Q9UPT8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC26.19■■□□□ 1.78
ZC3H4Q9UPT8 GXYLT1P3-201ENST00000453058 1193 ntBASIC26.19■■□□□ 1.78
ZC3H4Q9UPT8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC26.19■■□□□ 1.78
ZC3H4Q9UPT8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC26.19■■□□□ 1.78
ZC3H4Q9UPT8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC26.19■■□□□ 1.78
ZC3H4Q9UPT8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ZC3H4Q9UPT8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.19■■□□□ 1.78
ZC3H4Q9UPT8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ZC3H4Q9UPT8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
ZC3H4Q9UPT8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ZC3H4Q9UPT8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC26.18■■□□□ 1.78
ZC3H4Q9UPT8 AL359736.2-201ENST00000621992 437 ntBASIC26.18■■□□□ 1.78
ZC3H4Q9UPT8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC26.18■■□□□ 1.78
ZC3H4Q9UPT8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ZC3H4Q9UPT8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ZC3H4Q9UPT8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ZC3H4Q9UPT8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ZC3H4Q9UPT8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC26.18■■□□□ 1.78
ZC3H4Q9UPT8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.18■■□□□ 1.78
ZC3H4Q9UPT8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
ZC3H4Q9UPT8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC26.17■■□□□ 1.78
ZC3H4Q9UPT8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
ZC3H4Q9UPT8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.17■■□□□ 1.78
ZC3H4Q9UPT8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
ZC3H4Q9UPT8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ZC3H4Q9UPT8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.17■■□□□ 1.78
ZC3H4Q9UPT8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC26.16■■□□□ 1.78
ZC3H4Q9UPT8 AL162412.1-201ENST00000567129 965 ntBASIC26.16■■□□□ 1.78
ZC3H4Q9UPT8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC26.16■■□□□ 1.78
ZC3H4Q9UPT8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms