Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MACF1Q9UPN3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 KRT8P9-201ENST00000558927 1449 ntBASIC9.03□□□□□ -0.96
MACF1Q9UPN3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
MACF1Q9UPN3 AC105020.6-201ENST00000621523 1217 ntBASIC9.03□□□□□ -0.96
MACF1Q9UPN3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
MACF1Q9UPN3 AC005521.1-201ENST00000393351 872 ntBASIC9.02□□□□□ -0.96
MACF1Q9UPN3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC9.02□□□□□ -0.96
MACF1Q9UPN3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
MACF1Q9UPN3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC9.02□□□□□ -0.96
MACF1Q9UPN3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC9.02□□□□□ -0.96
MACF1Q9UPN3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 LINC02084-201ENST00000606069 1096 ntBASIC9.02□□□□□ -0.97
MACF1Q9UPN3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 SOX15-203ENST00000570788 1093 ntBASIC9.02□□□□□ -0.97
MACF1Q9UPN3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
MACF1Q9UPN3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 AC069544.1-201ENST00000609399 999 ntBASIC9.01□□□□□ -0.97
MACF1Q9UPN3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
MACF1Q9UPN3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC9□□□□□ -0.97
MACF1Q9UPN3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 BX664615.1-201ENST00000443558 458 ntBASIC9□□□□□ -0.97
MACF1Q9UPN3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC9□□□□□ -0.97
MACF1Q9UPN3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
MACF1Q9UPN3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
MACF1Q9UPN3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC9□□□□□ -0.97
MACF1Q9UPN3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
MACF1Q9UPN3 HES2-206ENST00000489730 730 ntTSL 2 BASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms