Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CAPN11Q9UMQ6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.21■■□□□ 1.31
CAPN11Q9UMQ6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CAPN11Q9UMQ6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CAPN11Q9UMQ6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CAPN11Q9UMQ6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CAPN11Q9UMQ6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CAPN11Q9UMQ6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.21■■□□□ 1.31
CAPN11Q9UMQ6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CAPN11Q9UMQ6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.21■■□□□ 1.31
CAPN11Q9UMQ6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.21■■□□□ 1.31
CAPN11Q9UMQ6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CAPN11Q9UMQ6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.21■■□□□ 1.31
CAPN11Q9UMQ6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CAPN11Q9UMQ6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CAPN11Q9UMQ6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CAPN11Q9UMQ6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CAPN11Q9UMQ6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 AL356740.2-201ENST00000601559 647 ntBASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CAPN11Q9UMQ6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CAPN11Q9UMQ6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.19■■□□□ 1.3
CAPN11Q9UMQ6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
CAPN11Q9UMQ6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CAPN11Q9UMQ6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.19■■□□□ 1.3
CAPN11Q9UMQ6 AC010141.3-201ENST00000456659 717 ntBASIC23.19■■□□□ 1.3
CAPN11Q9UMQ6 MIR3621-201ENST00000580529 85 ntBASIC23.19■■□□□ 1.3
CAPN11Q9UMQ6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CAPN11Q9UMQ6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CAPN11Q9UMQ6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CAPN11Q9UMQ6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.19■■□□□ 1.3
CAPN11Q9UMQ6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.19■■□□□ 1.3
CAPN11Q9UMQ6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CAPN11Q9UMQ6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.18■■□□□ 1.3
CAPN11Q9UMQ6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CAPN11Q9UMQ6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CAPN11Q9UMQ6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CAPN11Q9UMQ6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CAPN11Q9UMQ6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CAPN11Q9UMQ6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CAPN11Q9UMQ6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CAPN11Q9UMQ6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.18■■□□□ 1.3
CAPN11Q9UMQ6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.18■■□□□ 1.3
CAPN11Q9UMQ6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CAPN11Q9UMQ6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CAPN11Q9UMQ6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CAPN11Q9UMQ6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CAPN11Q9UMQ6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CAPN11Q9UMQ6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CAPN11Q9UMQ6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.17■■□□□ 1.3
CAPN11Q9UMQ6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.17■■□□□ 1.3
CAPN11Q9UMQ6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.17■■□□□ 1.3
CAPN11Q9UMQ6 AC087239.1-201ENST00000622671 572 ntBASIC23.17■■□□□ 1.3
CAPN11Q9UMQ6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.17■■□□□ 1.3
CAPN11Q9UMQ6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.17■■□□□ 1.3
CAPN11Q9UMQ6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CAPN11Q9UMQ6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CAPN11Q9UMQ6 OXCT2P1-201ENST00000447263 1535 ntBASIC23.16■■□□□ 1.3
CAPN11Q9UMQ6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CAPN11Q9UMQ6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CAPN11Q9UMQ6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.16■■□□□ 1.3
CAPN11Q9UMQ6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
CAPN11Q9UMQ6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CAPN11Q9UMQ6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CAPN11Q9UMQ6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.15■■□□□ 1.3
CAPN11Q9UMQ6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CAPN11Q9UMQ6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CAPN11Q9UMQ6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.15■■□□□ 1.3
CAPN11Q9UMQ6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CAPN11Q9UMQ6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CAPN11Q9UMQ6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
CAPN11Q9UMQ6 AC010525.1-201ENST00000585559 441 ntBASIC23.15■■□□□ 1.3
CAPN11Q9UMQ6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.15■■□□□ 1.3
CAPN11Q9UMQ6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms