Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TSR3Q9UJK0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.27■■□□□ 1
TSR3Q9UJK0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.27■■□□□ 1
TSR3Q9UJK0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.27■■□□□ 1
TSR3Q9UJK0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TSR3Q9UJK0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TSR3Q9UJK0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
TSR3Q9UJK0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TSR3Q9UJK0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.26■□□□□ 0.99
TSR3Q9UJK0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.26■□□□□ 0.99
TSR3Q9UJK0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TSR3Q9UJK0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TSR3Q9UJK0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.26■□□□□ 0.99
TSR3Q9UJK0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.26■□□□□ 0.99
TSR3Q9UJK0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSR3Q9UJK0 OR7E47P-201ENST00000546390 1422 ntBASIC21.26■□□□□ 0.99
TSR3Q9UJK0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.26■□□□□ 0.99
TSR3Q9UJK0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TSR3Q9UJK0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
TSR3Q9UJK0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSR3Q9UJK0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TSR3Q9UJK0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TSR3Q9UJK0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 AC027682.1-201ENST00000562846 899 ntBASIC21.25■□□□□ 0.99
TSR3Q9UJK0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 AL355001.2-201ENST00000620617 1191 ntBASIC21.25■□□□□ 0.99
TSR3Q9UJK0 AC068587.7-201ENST00000641602 218 ntBASIC21.25■□□□□ 0.99
TSR3Q9UJK0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 TSPY26P-201ENST00000476365 1326 ntBASIC21.25■□□□□ 0.99
TSR3Q9UJK0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TSR3Q9UJK0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TSR3Q9UJK0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TSR3Q9UJK0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TSR3Q9UJK0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
TSR3Q9UJK0 EDA-201ENST00000338901 1233 ntBASIC21.24■□□□□ 0.99
TSR3Q9UJK0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.24■□□□□ 0.99
TSR3Q9UJK0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TSR3Q9UJK0 AL031432.3-201ENST00000607698 485 ntBASIC21.24■□□□□ 0.99
TSR3Q9UJK0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TSR3Q9UJK0 FAM99A-202ENST00000538190 1989 ntBASIC21.24■□□□□ 0.99
TSR3Q9UJK0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TSR3Q9UJK0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TSR3Q9UJK0 OXCT2P1-201ENST00000447263 1535 ntBASIC21.24■□□□□ 0.99
TSR3Q9UJK0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.24■□□□□ 0.99
TSR3Q9UJK0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TSR3Q9UJK0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 AP005435.1-201ENST00000529293 1178 ntBASIC21.23■□□□□ 0.99
TSR3Q9UJK0 AC142381.2-201ENST00000566120 298 ntBASIC21.23■□□□□ 0.99
TSR3Q9UJK0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSR3Q9UJK0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSR3Q9UJK0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSR3Q9UJK0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSR3Q9UJK0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
TSR3Q9UJK0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.22■□□□□ 0.99
TSR3Q9UJK0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
TSR3Q9UJK0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSR3Q9UJK0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TSR3Q9UJK0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSR3Q9UJK0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.22■□□□□ 0.99
TSR3Q9UJK0 MIR939-201ENST00000401314 82 ntBASIC21.22■□□□□ 0.99
TSR3Q9UJK0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.22■□□□□ 0.99
TSR3Q9UJK0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.22■□□□□ 0.99
TSR3Q9UJK0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TSR3Q9UJK0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSR3Q9UJK0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSR3Q9UJK0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms