Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TREM2Q9NZC2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TREM2Q9NZC2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TREM2Q9NZC2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TREM2Q9NZC2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.46■□□□□ 0.55
TREM2Q9NZC2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TREM2Q9NZC2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.46■□□□□ 0.55
TREM2Q9NZC2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.46■□□□□ 0.55
TREM2Q9NZC2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.46■□□□□ 0.55
TREM2Q9NZC2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TREM2Q9NZC2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TREM2Q9NZC2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
TREM2Q9NZC2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.46■□□□□ 0.54
TREM2Q9NZC2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.45■□□□□ 0.54
TREM2Q9NZC2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TREM2Q9NZC2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TREM2Q9NZC2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.45■□□□□ 0.54
TREM2Q9NZC2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TREM2Q9NZC2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.45■□□□□ 0.54
TREM2Q9NZC2 AC092053.2-201ENST00000640557 1818 ntBASIC18.45■□□□□ 0.54
TREM2Q9NZC2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TREM2Q9NZC2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.45■□□□□ 0.54
TREM2Q9NZC2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TREM2Q9NZC2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TREM2Q9NZC2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
TREM2Q9NZC2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TREM2Q9NZC2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TREM2Q9NZC2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TREM2Q9NZC2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.45■□□□□ 0.54
TREM2Q9NZC2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TREM2Q9NZC2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.44■□□□□ 0.54
TREM2Q9NZC2 AC139530.1-201ENST00000575312 1977 ntBASIC18.44■□□□□ 0.54
TREM2Q9NZC2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TREM2Q9NZC2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TREM2Q9NZC2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TREM2Q9NZC2 MIR572-201ENST00000384983 95 ntBASIC18.44■□□□□ 0.54
TREM2Q9NZC2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TREM2Q9NZC2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.44■□□□□ 0.54
TREM2Q9NZC2 AL031602.1-201ENST00000633169 911 ntBASIC18.44■□□□□ 0.54
TREM2Q9NZC2 AC105233.4-201ENST00000642045 216 ntBASIC18.44■□□□□ 0.54
TREM2Q9NZC2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.44■□□□□ 0.54
TREM2Q9NZC2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TREM2Q9NZC2 LINC00565-201ENST00000562710 2331 ntBASIC18.44■□□□□ 0.54
TREM2Q9NZC2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TREM2Q9NZC2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TREM2Q9NZC2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.43■□□□□ 0.54
TREM2Q9NZC2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TREM2Q9NZC2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TREM2Q9NZC2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TREM2Q9NZC2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TREM2Q9NZC2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TREM2Q9NZC2 AC137767.1-201ENST00000602918 1920 ntBASIC18.43■□□□□ 0.54
TREM2Q9NZC2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TREM2Q9NZC2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TREM2Q9NZC2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TREM2Q9NZC2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.43■□□□□ 0.54
TREM2Q9NZC2 AC010141.3-201ENST00000456659 717 ntBASIC18.43■□□□□ 0.54
TREM2Q9NZC2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.43■□□□□ 0.54
TREM2Q9NZC2 AC087239.1-201ENST00000622671 572 ntBASIC18.43■□□□□ 0.54
TREM2Q9NZC2 AL358852.1-201ENST00000623174 1268 ntBASIC18.43■□□□□ 0.54
TREM2Q9NZC2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TREM2Q9NZC2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TREM2Q9NZC2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
TREM2Q9NZC2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TREM2Q9NZC2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
TREM2Q9NZC2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TREM2Q9NZC2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TREM2Q9NZC2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TREM2Q9NZC2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TREM2Q9NZC2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.42■□□□□ 0.54
TREM2Q9NZC2 YBX1P1-201ENST00000445822 960 ntBASIC18.42■□□□□ 0.54
TREM2Q9NZC2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.42■□□□□ 0.54
TREM2Q9NZC2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.42■□□□□ 0.54
TREM2Q9NZC2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TREM2Q9NZC2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TREM2Q9NZC2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TREM2Q9NZC2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TREM2Q9NZC2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 AC012414.1-201ENST00000556676 535 ntBASIC18.41■□□□□ 0.54
TREM2Q9NZC2 AC068587.7-201ENST00000641602 218 ntBASIC18.41■□□□□ 0.54
TREM2Q9NZC2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TREM2Q9NZC2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms