Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CUEDC1Q9NWM3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CUEDC1Q9NWM3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CUEDC1Q9NWM3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CUEDC1Q9NWM3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CUEDC1Q9NWM3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.76■□□□□ 0.91
CUEDC1Q9NWM3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CUEDC1Q9NWM3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CUEDC1Q9NWM3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CUEDC1Q9NWM3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.75■□□□□ 0.91
CUEDC1Q9NWM3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.75■□□□□ 0.91
CUEDC1Q9NWM3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.75■□□□□ 0.91
CUEDC1Q9NWM3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.75■□□□□ 0.91
CUEDC1Q9NWM3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.75■□□□□ 0.91
CUEDC1Q9NWM3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CUEDC1Q9NWM3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CUEDC1Q9NWM3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CUEDC1Q9NWM3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CUEDC1Q9NWM3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.74■□□□□ 0.91
CUEDC1Q9NWM3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.74■□□□□ 0.91
CUEDC1Q9NWM3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CUEDC1Q9NWM3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CUEDC1Q9NWM3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CUEDC1Q9NWM3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CUEDC1Q9NWM3 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.74■□□□□ 0.91
CUEDC1Q9NWM3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.74■□□□□ 0.91
CUEDC1Q9NWM3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.74■□□□□ 0.91
CUEDC1Q9NWM3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.74■□□□□ 0.91
CUEDC1Q9NWM3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CUEDC1Q9NWM3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CUEDC1Q9NWM3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CUEDC1Q9NWM3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.73■□□□□ 0.91
CUEDC1Q9NWM3 AP004607.7-201ENST00000527152 1677 ntBASIC20.73■□□□□ 0.91
CUEDC1Q9NWM3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.73■□□□□ 0.91
CUEDC1Q9NWM3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.73■□□□□ 0.91
CUEDC1Q9NWM3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CUEDC1Q9NWM3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CUEDC1Q9NWM3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CUEDC1Q9NWM3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.73■□□□□ 0.91
CUEDC1Q9NWM3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CUEDC1Q9NWM3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CUEDC1Q9NWM3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.73■□□□□ 0.91
CUEDC1Q9NWM3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.73■□□□□ 0.91
CUEDC1Q9NWM3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.73■□□□□ 0.91
CUEDC1Q9NWM3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CUEDC1Q9NWM3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.73■□□□□ 0.91
CUEDC1Q9NWM3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CUEDC1Q9NWM3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CUEDC1Q9NWM3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 AL137784.2-201ENST00000607332 1000 ntBASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 AL354811.1-201ENST00000610286 706 ntBASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 AL358852.1-201ENST00000623174 1268 ntBASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.72■□□□□ 0.91
CUEDC1Q9NWM3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CUEDC1Q9NWM3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CUEDC1Q9NWM3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CUEDC1Q9NWM3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CUEDC1Q9NWM3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CUEDC1Q9NWM3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.71■□□□□ 0.91
CUEDC1Q9NWM3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.71■□□□□ 0.91
CUEDC1Q9NWM3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.71■□□□□ 0.91
CUEDC1Q9NWM3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CUEDC1Q9NWM3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.71■□□□□ 0.91
CUEDC1Q9NWM3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CUEDC1Q9NWM3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.71■□□□□ 0.91
CUEDC1Q9NWM3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
CUEDC1Q9NWM3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CUEDC1Q9NWM3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.7■□□□□ 0.9
CUEDC1Q9NWM3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CUEDC1Q9NWM3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.7■□□□□ 0.9
CUEDC1Q9NWM3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CUEDC1Q9NWM3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CUEDC1Q9NWM3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CUEDC1Q9NWM3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CUEDC1Q9NWM3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CUEDC1Q9NWM3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CUEDC1Q9NWM3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CUEDC1Q9NWM3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CUEDC1Q9NWM3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
CUEDC1Q9NWM3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms