Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTPS2Q9NRF8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTPS2Q9NRF8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTPS2Q9NRF8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CTPS2Q9NRF8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTPS2Q9NRF8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
CTPS2Q9NRF8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 AC011298.3-201ENST00000615796 283 ntBASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTPS2Q9NRF8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTPS2Q9NRF8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.9■□□□□ 0.78
CTPS2Q9NRF8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CTPS2Q9NRF8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTPS2Q9NRF8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTPS2Q9NRF8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTPS2Q9NRF8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CTPS2Q9NRF8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTPS2Q9NRF8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.9■□□□□ 0.78
CTPS2Q9NRF8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.9■□□□□ 0.78
CTPS2Q9NRF8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.9■□□□□ 0.78
CTPS2Q9NRF8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTPS2Q9NRF8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTPS2Q9NRF8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTPS2Q9NRF8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CTPS2Q9NRF8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTPS2Q9NRF8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTPS2Q9NRF8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTPS2Q9NRF8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.89■□□□□ 0.77
CTPS2Q9NRF8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.89■□□□□ 0.77
CTPS2Q9NRF8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.89■□□□□ 0.77
CTPS2Q9NRF8 AC136469.2-201ENST00000623944 1028 ntBASIC19.89■□□□□ 0.77
CTPS2Q9NRF8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTPS2Q9NRF8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTPS2Q9NRF8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTPS2Q9NRF8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTPS2Q9NRF8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.87■□□□□ 0.77
CTPS2Q9NRF8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.87■□□□□ 0.77
CTPS2Q9NRF8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTPS2Q9NRF8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.87■□□□□ 0.77
CTPS2Q9NRF8 AC096631.2-201ENST00000436136 790 ntBASIC19.87■□□□□ 0.77
CTPS2Q9NRF8 OR2I1P-207ENST00000453522 948 ntBASIC19.87■□□□□ 0.77
CTPS2Q9NRF8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.87■□□□□ 0.77
CTPS2Q9NRF8 AL136162.1-201ENST00000607711 1078 ntBASIC19.87■□□□□ 0.77
CTPS2Q9NRF8 AL031602.1-201ENST00000633169 911 ntBASIC19.87■□□□□ 0.77
CTPS2Q9NRF8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTPS2Q9NRF8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CTPS2Q9NRF8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTPS2Q9NRF8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CTPS2Q9NRF8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTPS2Q9NRF8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTPS2Q9NRF8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTPS2Q9NRF8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTPS2Q9NRF8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTPS2Q9NRF8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.86■□□□□ 0.77
CTPS2Q9NRF8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTPS2Q9NRF8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
CTPS2Q9NRF8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTPS2Q9NRF8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTPS2Q9NRF8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTPS2Q9NRF8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms