Protein–RNA interactions for Protein: Q9H7V2

SYNDIG1, Synapse differentiation-inducing gene protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1Q9H7V2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 KRT18P11-201ENST00000435214 1283 ntBASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 RAP2CP1-201ENST00000605103 478 ntBASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNDIG1Q9H7V2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SYNDIG1Q9H7V2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNDIG1Q9H7V2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SYNDIG1Q9H7V2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNDIG1Q9H7V2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNDIG1Q9H7V2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SYNDIG1Q9H7V2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNDIG1Q9H7V2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNDIG1Q9H7V2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNDIG1Q9H7V2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.93■□□□□ 0.94
SYNDIG1Q9H7V2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SYNDIG1Q9H7V2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SYNDIG1Q9H7V2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNDIG1Q9H7V2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SYNDIG1Q9H7V2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.93■□□□□ 0.94
SYNDIG1Q9H7V2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SYNDIG1Q9H7V2 DUSP8P3-201ENST00000399571 1760 ntBASIC20.92■□□□□ 0.94
SYNDIG1Q9H7V2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.92■□□□□ 0.94
SYNDIG1Q9H7V2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYNDIG1Q9H7V2 CLDN5-201ENST00000403084 2357 ntBASIC20.92■□□□□ 0.94
SYNDIG1Q9H7V2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYNDIG1Q9H7V2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
SYNDIG1Q9H7V2 AC104187.1-201ENST00000607510 612 ntBASIC20.92■□□□□ 0.94
SYNDIG1Q9H7V2 AL109923.1-201ENST00000618799 583 ntBASIC20.92■□□□□ 0.94
SYNDIG1Q9H7V2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYNDIG1Q9H7V2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYNDIG1Q9H7V2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 AC005224.4-201ENST00000583262 1652 ntBASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 AC104771.1-201ENST00000603335 964 ntBASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYNDIG1Q9H7V2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.9■□□□□ 0.94
SYNDIG1Q9H7V2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.9■□□□□ 0.94
SYNDIG1Q9H7V2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SYNDIG1Q9H7V2 KRT87P-202ENST00000534226 1464 ntBASIC20.9■□□□□ 0.94
SYNDIG1Q9H7V2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYNDIG1Q9H7V2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SYNDIG1Q9H7V2 CROCCP5-201ENST00000436658 830 ntBASIC20.9■□□□□ 0.94
SYNDIG1Q9H7V2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.9■□□□□ 0.94
SYNDIG1Q9H7V2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.9■□□□□ 0.94
SYNDIG1Q9H7V2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SYNDIG1Q9H7V2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.9■□□□□ 0.94
SYNDIG1Q9H7V2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYNDIG1Q9H7V2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYNDIG1Q9H7V2 ANOS2P-203ENST00000472227 1816 ntBASIC20.9■□□□□ 0.94
SYNDIG1Q9H7V2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYNDIG1Q9H7V2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
SYNDIG1Q9H7V2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SYNDIG1Q9H7V2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.89■□□□□ 0.94
SYNDIG1Q9H7V2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
SYNDIG1Q9H7V2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
SYNDIG1Q9H7V2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SYNDIG1Q9H7V2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.89■□□□□ 0.93
SYNDIG1Q9H7V2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNDIG1Q9H7V2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
SYNDIG1Q9H7V2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.89■□□□□ 0.93
SYNDIG1Q9H7V2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.89■□□□□ 0.93
SYNDIG1Q9H7V2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNDIG1Q9H7V2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.89■□□□□ 0.93
SYNDIG1Q9H7V2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SYNDIG1Q9H7V2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SYNDIG1Q9H7V2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms