Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN3Q9H347 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN3Q9H347 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN3Q9H347 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN3Q9H347 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN3Q9H347 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.87■□□□□ 0.77
UBQLN3Q9H347 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.87■□□□□ 0.77
UBQLN3Q9H347 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.87■□□□□ 0.77
UBQLN3Q9H347 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.87■□□□□ 0.77
UBQLN3Q9H347 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN3Q9H347 AL354811.1-201ENST00000610286 706 ntBASIC19.87■□□□□ 0.77
UBQLN3Q9H347 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.87■□□□□ 0.77
UBQLN3Q9H347 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.87■□□□□ 0.77
UBQLN3Q9H347 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
UBQLN3Q9H347 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.87■□□□□ 0.77
UBQLN3Q9H347 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN3Q9H347 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN3Q9H347 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN3Q9H347 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN3Q9H347 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN3Q9H347 FBXW4P1-201ENST00000426721 2239 ntBASIC19.86■□□□□ 0.77
UBQLN3Q9H347 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN3Q9H347 AC027612.3-201ENST00000413684 1047 ntBASIC19.86■□□□□ 0.77
UBQLN3Q9H347 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
UBQLN3Q9H347 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.86■□□□□ 0.77
UBQLN3Q9H347 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
UBQLN3Q9H347 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN3Q9H347 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN3Q9H347 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
UBQLN3Q9H347 LINC01960-201ENST00000563759 1884 ntBASIC19.86■□□□□ 0.77
UBQLN3Q9H347 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN3Q9H347 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN3Q9H347 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
UBQLN3Q9H347 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.85■□□□□ 0.77
UBQLN3Q9H347 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.85■□□□□ 0.77
UBQLN3Q9H347 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.85■□□□□ 0.77
UBQLN3Q9H347 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.85■□□□□ 0.77
UBQLN3Q9H347 AC010141.3-201ENST00000456659 717 ntBASIC19.85■□□□□ 0.77
UBQLN3Q9H347 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UBQLN3Q9H347 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN3Q9H347 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.85■□□□□ 0.77
UBQLN3Q9H347 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN3Q9H347 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
UBQLN3Q9H347 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN3Q9H347 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN3Q9H347 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.84■□□□□ 0.77
UBQLN3Q9H347 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.84■□□□□ 0.77
UBQLN3Q9H347 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN3Q9H347 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.84■□□□□ 0.77
UBQLN3Q9H347 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN3Q9H347 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN3Q9H347 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN3Q9H347 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.84■□□□□ 0.77
UBQLN3Q9H347 AC087239.1-201ENST00000622671 572 ntBASIC19.84■□□□□ 0.77
UBQLN3Q9H347 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN3Q9H347 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.84■□□□□ 0.77
UBQLN3Q9H347 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.84■□□□□ 0.77
UBQLN3Q9H347 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.84■□□□□ 0.77
UBQLN3Q9H347 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBQLN3Q9H347 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.83■□□□□ 0.77
UBQLN3Q9H347 YBX1P1-201ENST00000445822 960 ntBASIC19.83■□□□□ 0.77
UBQLN3Q9H347 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.83■□□□□ 0.77
UBQLN3Q9H347 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBQLN3Q9H347 AC087623.3-201ENST00000607047 1098 ntBASIC19.83■□□□□ 0.77
UBQLN3Q9H347 MIR5787-201ENST00000611784 55 ntBASIC19.83■□□□□ 0.77
UBQLN3Q9H347 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBQLN3Q9H347 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBQLN3Q9H347 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBQLN3Q9H347 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBQLN3Q9H347 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN3Q9H347 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN3Q9H347 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.82■□□□□ 0.76
UBQLN3Q9H347 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN3Q9H347 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN3Q9H347 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN3Q9H347 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN3Q9H347 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.82■□□□□ 0.76
UBQLN3Q9H347 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.82■□□□□ 0.76
UBQLN3Q9H347 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.82■□□□□ 0.76
UBQLN3Q9H347 AC105233.4-201ENST00000642045 216 ntBASIC19.82■□□□□ 0.76
UBQLN3Q9H347 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.82■□□□□ 0.76
UBQLN3Q9H347 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN3Q9H347 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN3Q9H347 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.82■□□□□ 0.76
UBQLN3Q9H347 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN3Q9H347 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBQLN3Q9H347 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBQLN3Q9H347 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBQLN3Q9H347 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBQLN3Q9H347 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.81■□□□□ 0.76
UBQLN3Q9H347 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
UBQLN3Q9H347 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms