Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.25■■□□□ 1.31
NUCKS1Q9H1E3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NUCKS1Q9H1E3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.25■■□□□ 1.31
NUCKS1Q9H1E3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NUCKS1Q9H1E3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
NUCKS1Q9H1E3 OR2I1P-207ENST00000453522 948 ntBASIC23.25■■□□□ 1.31
NUCKS1Q9H1E3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.25■■□□□ 1.31
NUCKS1Q9H1E3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.25■■□□□ 1.31
NUCKS1Q9H1E3 AC087239.1-201ENST00000622671 572 ntBASIC23.25■■□□□ 1.31
NUCKS1Q9H1E3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
NUCKS1Q9H1E3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
NUCKS1Q9H1E3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NUCKS1Q9H1E3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NUCKS1Q9H1E3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NUCKS1Q9H1E3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NUCKS1Q9H1E3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NUCKS1Q9H1E3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.24■■□□□ 1.31
NUCKS1Q9H1E3 UNC93B3-201ENST00000308076 687 ntBASIC23.24■■□□□ 1.31
NUCKS1Q9H1E3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NUCKS1Q9H1E3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.24■■□□□ 1.31
NUCKS1Q9H1E3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
NUCKS1Q9H1E3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.24■■□□□ 1.31
NUCKS1Q9H1E3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NUCKS1Q9H1E3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NUCKS1Q9H1E3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
NUCKS1Q9H1E3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
NUCKS1Q9H1E3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.23■■□□□ 1.31
NUCKS1Q9H1E3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NUCKS1Q9H1E3 MIR3181-201ENST00000578512 73 ntBASIC23.23■■□□□ 1.31
NUCKS1Q9H1E3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.23■■□□□ 1.31
NUCKS1Q9H1E3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.23■■□□□ 1.31
NUCKS1Q9H1E3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
NUCKS1Q9H1E3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
NUCKS1Q9H1E3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NUCKS1Q9H1E3 Z98882.1-201ENST00000622160 2253 ntBASIC23.22■■□□□ 1.31
NUCKS1Q9H1E3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
NUCKS1Q9H1E3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NUCKS1Q9H1E3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
NUCKS1Q9H1E3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
NUCKS1Q9H1E3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NUCKS1Q9H1E3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.22■■□□□ 1.31
NUCKS1Q9H1E3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NUCKS1Q9H1E3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
NUCKS1Q9H1E3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NUCKS1Q9H1E3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NUCKS1Q9H1E3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.21■■□□□ 1.31
NUCKS1Q9H1E3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.21■■□□□ 1.31
NUCKS1Q9H1E3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
NUCKS1Q9H1E3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NUCKS1Q9H1E3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.21■■□□□ 1.31
NUCKS1Q9H1E3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NUCKS1Q9H1E3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NUCKS1Q9H1E3 AC104564.3-201ENST00000582367 638 ntBASIC23.21■■□□□ 1.31
NUCKS1Q9H1E3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.21■■□□□ 1.31
NUCKS1Q9H1E3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NUCKS1Q9H1E3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
NUCKS1Q9H1E3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NUCKS1Q9H1E3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
NUCKS1Q9H1E3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.2■■□□□ 1.3
NUCKS1Q9H1E3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
NUCKS1Q9H1E3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NUCKS1Q9H1E3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
NUCKS1Q9H1E3 SYT6-210ENST00000641643 1587 ntBASIC23.2■■□□□ 1.3
NUCKS1Q9H1E3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NUCKS1Q9H1E3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NUCKS1Q9H1E3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
NUCKS1Q9H1E3 SERBP1P1-201ENST00000396021 1160 ntBASIC23.2■■□□□ 1.3
NUCKS1Q9H1E3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NUCKS1Q9H1E3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NUCKS1Q9H1E3 AL136162.1-201ENST00000607711 1078 ntBASIC23.2■■□□□ 1.3
NUCKS1Q9H1E3 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.2■■□□□ 1.3
NUCKS1Q9H1E3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NUCKS1Q9H1E3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
NUCKS1Q9H1E3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NUCKS1Q9H1E3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.19■■□□□ 1.3
NUCKS1Q9H1E3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.19■■□□□ 1.3
NUCKS1Q9H1E3 MIR638-201ENST00000385237 100 ntBASIC23.19■■□□□ 1.3
NUCKS1Q9H1E3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
NUCKS1Q9H1E3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
NUCKS1Q9H1E3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.19■■□□□ 1.3
NUCKS1Q9H1E3 DUX4L19-201ENST00000557448 1267 ntBASIC23.19■■□□□ 1.3
NUCKS1Q9H1E3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
NUCKS1Q9H1E3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NUCKS1Q9H1E3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NUCKS1Q9H1E3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NUCKS1Q9H1E3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NUCKS1Q9H1E3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NUCKS1Q9H1E3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.18■■□□□ 1.3
NUCKS1Q9H1E3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NUCKS1Q9H1E3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NUCKS1Q9H1E3 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.18■■□□□ 1.3
NUCKS1Q9H1E3 AC010141.3-201ENST00000456659 717 ntBASIC23.18■■□□□ 1.3
NUCKS1Q9H1E3 PBX2P1-201ENST00000493219 1291 ntBASIC23.18■■□□□ 1.3
NUCKS1Q9H1E3 AC024257.2-201ENST00000549699 147 ntBASIC23.18■■□□□ 1.3
NUCKS1Q9H1E3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.18■■□□□ 1.3
NUCKS1Q9H1E3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.18■■□□□ 1.3
NUCKS1Q9H1E3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.18■■□□□ 1.3
NUCKS1Q9H1E3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
NUCKS1Q9H1E3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.18■■□□□ 1.3
NUCKS1Q9H1E3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms