Protein–RNA interactions for Protein: Q9H0K1

SIK2, Serine/threonine-protein kinase SIK2, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK2Q9H0K1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIK2Q9H0K1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.27■■□□□ 1.16
SIK2Q9H0K1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIK2Q9H0K1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIK2Q9H0K1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
SIK2Q9H0K1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SIK2Q9H0K1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.27■■□□□ 1.16
SIK2Q9H0K1 RARRES2P6-201ENST00000567333 442 ntBASIC22.27■■□□□ 1.16
SIK2Q9H0K1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.27■■□□□ 1.16
SIK2Q9H0K1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIK2Q9H0K1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIK2Q9H0K1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SIK2Q9H0K1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
SIK2Q9H0K1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.26■■□□□ 1.15
SIK2Q9H0K1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.26■■□□□ 1.15
SIK2Q9H0K1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SIK2Q9H0K1 EP400NL-214ENST00000641289 2402 ntBASIC22.26■■□□□ 1.15
SIK2Q9H0K1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SIK2Q9H0K1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SIK2Q9H0K1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SIK2Q9H0K1 YBX1P1-201ENST00000445822 960 ntBASIC22.26■■□□□ 1.15
SIK2Q9H0K1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SIK2Q9H0K1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SIK2Q9H0K1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SIK2Q9H0K1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
SIK2Q9H0K1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SIK2Q9H0K1 AC092053.2-201ENST00000640557 1818 ntBASIC22.26■■□□□ 1.15
SIK2Q9H0K1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SIK2Q9H0K1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIK2Q9H0K1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SIK2Q9H0K1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SIK2Q9H0K1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIK2Q9H0K1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SIK2Q9H0K1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIK2Q9H0K1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIK2Q9H0K1 AC026271.2-201ENST00000428091 497 ntBASIC22.25■■□□□ 1.15
SIK2Q9H0K1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SIK2Q9H0K1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SIK2Q9H0K1 ECEL1P1-201ENST00000373592 1742 ntBASIC22.25■■□□□ 1.15
SIK2Q9H0K1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.25■■□□□ 1.15
SIK2Q9H0K1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.25■■□□□ 1.15
SIK2Q9H0K1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
SIK2Q9H0K1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
SIK2Q9H0K1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIK2Q9H0K1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SIK2Q9H0K1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.24■■□□□ 1.15
SIK2Q9H0K1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SIK2Q9H0K1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIK2Q9H0K1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SIK2Q9H0K1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
SIK2Q9H0K1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.24■■□□□ 1.15
SIK2Q9H0K1 TPRG1LP1-201ENST00000598702 760 ntBASIC22.24■■□□□ 1.15
SIK2Q9H0K1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.24■■□□□ 1.15
SIK2Q9H0K1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 AC097381.1-201ENST00000429019 1296 ntBASIC22.23■■□□□ 1.15
SIK2Q9H0K1 AC123595.1-201ENST00000440769 1046 ntBASIC22.23■■□□□ 1.15
SIK2Q9H0K1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 AL034346.1-201ENST00000568244 1277 ntBASIC22.23■■□□□ 1.15
SIK2Q9H0K1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 LINC02228-203ENST00000641970 1355 ntBASIC22.23■■□□□ 1.15
SIK2Q9H0K1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIK2Q9H0K1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SIK2Q9H0K1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
SIK2Q9H0K1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SIK2Q9H0K1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.22■■□□□ 1.15
SIK2Q9H0K1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SIK2Q9H0K1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
SIK2Q9H0K1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SIK2Q9H0K1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SIK2Q9H0K1 AC087623.3-201ENST00000607047 1098 ntBASIC22.22■■□□□ 1.15
SIK2Q9H0K1 MIR6821-201ENST00000617625 74 ntBASIC22.22■■□□□ 1.15
SIK2Q9H0K1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.22■■□□□ 1.15
SIK2Q9H0K1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SIK2Q9H0K1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SIK2Q9H0K1 AC009237.3-201ENST00000393279 1427 ntBASIC22.22■■□□□ 1.15
SIK2Q9H0K1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SIK2Q9H0K1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
SIK2Q9H0K1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SIK2Q9H0K1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.21■■□□□ 1.15
SIK2Q9H0K1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.21■■□□□ 1.15
SIK2Q9H0K1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SIK2Q9H0K1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
SIK2Q9H0K1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
SIK2Q9H0K1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms