Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAF4Q9BUZ4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF4Q9BUZ4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TRAF4Q9BUZ4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF4Q9BUZ4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TRAF4Q9BUZ4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF4Q9BUZ4 AL391422.3-201ENST00000603791 2761 ntBASIC19.1■□□□□ 0.65
TRAF4Q9BUZ4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAF4Q9BUZ4 TSPY26P-201ENST00000476365 1326 ntBASIC19.09■□□□□ 0.65
TRAF4Q9BUZ4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF4Q9BUZ4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.09■□□□□ 0.65
TRAF4Q9BUZ4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.09■□□□□ 0.65
TRAF4Q9BUZ4 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAF4Q9BUZ4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAF4Q9BUZ4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAF4Q9BUZ4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TRAF4Q9BUZ4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAF4Q9BUZ4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF4Q9BUZ4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TRAF4Q9BUZ4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF4Q9BUZ4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF4Q9BUZ4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
TRAF4Q9BUZ4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF4Q9BUZ4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.08■□□□□ 0.65
TRAF4Q9BUZ4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF4Q9BUZ4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF4Q9BUZ4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF4Q9BUZ4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
TRAF4Q9BUZ4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAF4Q9BUZ4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAF4Q9BUZ4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.08■□□□□ 0.64
TRAF4Q9BUZ4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.08■□□□□ 0.64
TRAF4Q9BUZ4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.08■□□□□ 0.64
TRAF4Q9BUZ4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TRAF4Q9BUZ4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.08■□□□□ 0.64
TRAF4Q9BUZ4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TRAF4Q9BUZ4 AC133637.1-201ENST00000624115 1537 ntBASIC19.08■□□□□ 0.64
TRAF4Q9BUZ4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAF4Q9BUZ4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRAF4Q9BUZ4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
TRAF4Q9BUZ4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAF4Q9BUZ4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAF4Q9BUZ4 AC007952.6-201ENST00000573168 2673 ntBASIC19.08■□□□□ 0.64
TRAF4Q9BUZ4 AC003957.1-201ENST00000625108 2673 ntBASIC19.08■□□□□ 0.64
TRAF4Q9BUZ4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 AC139530.1-201ENST00000575312 1977 ntBASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 AL499627.2-201ENST00000606283 725 ntBASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAF4Q9BUZ4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAF4Q9BUZ4 FP325331.1-202ENST00000623531 1380 ntBASIC19.06■□□□□ 0.64
TRAF4Q9BUZ4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRAF4Q9BUZ4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAF4Q9BUZ4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAF4Q9BUZ4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAF4Q9BUZ4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAF4Q9BUZ4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.06■□□□□ 0.64
TRAF4Q9BUZ4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.06■□□□□ 0.64
TRAF4Q9BUZ4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRAF4Q9BUZ4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAF4Q9BUZ4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAF4Q9BUZ4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAF4Q9BUZ4 LINC01521-201ENST00000504184 1943 ntBASIC19.06■□□□□ 0.64
TRAF4Q9BUZ4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRAF4Q9BUZ4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 IGHV3-19-201ENST00000521488 291 ntBASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 DUX4L4-201ENST00000566884 1269 ntBASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAF4Q9BUZ4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms