Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRDL1Q9BU40 AC131281.2-201ENST00000520478 145 ntBASIC16.98■□□□□ 0.31
CHRDL1Q9BU40 MIR3181-201ENST00000578512 73 ntBASIC16.98■□□□□ 0.31
CHRDL1Q9BU40 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.98■□□□□ 0.31
CHRDL1Q9BU40 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CHRDL1Q9BU40 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHRDL1Q9BU40 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CHRDL1Q9BU40 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CHRDL1Q9BU40 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRDL1Q9BU40 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 AC139530.1-201ENST00000575312 1977 ntBASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHRDL1Q9BU40 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRDL1Q9BU40 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRDL1Q9BU40 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRDL1Q9BU40 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRDL1Q9BU40 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRDL1Q9BU40 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CHRDL1Q9BU40 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CHRDL1Q9BU40 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHRDL1Q9BU40 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHRDL1Q9BU40 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.96■□□□□ 0.3
CHRDL1Q9BU40 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHRDL1Q9BU40 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CHRDL1Q9BU40 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CHRDL1Q9BU40 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.96■□□□□ 0.3
CHRDL1Q9BU40 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHRDL1Q9BU40 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 AC092171.4-201ENST00000609130 632 ntBASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRDL1Q9BU40 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRDL1Q9BU40 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 AC131212.1-201ENST00000613771 668 ntBASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRDL1Q9BU40 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms