Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CGREF1Q99674 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CGREF1Q99674 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CGREF1Q99674 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.37■□□□□ 0.85
CGREF1Q99674 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CGREF1Q99674 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CGREF1Q99674 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CGREF1Q99674 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CGREF1Q99674 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CGREF1Q99674 TSPY9P-201ENST00000440215 945 ntBASIC20.36■□□□□ 0.85
CGREF1Q99674 TSPY11P-201ENST00000442607 1045 ntBASIC20.36■□□□□ 0.85
CGREF1Q99674 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.36■□□□□ 0.85
CGREF1Q99674 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CGREF1Q99674 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.36■□□□□ 0.85
CGREF1Q99674 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CGREF1Q99674 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CGREF1Q99674 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CGREF1Q99674 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CGREF1Q99674 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CGREF1Q99674 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CGREF1Q99674 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CGREF1Q99674 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CGREF1Q99674 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CGREF1Q99674 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.35■□□□□ 0.85
CGREF1Q99674 AC239859.2-201ENST00000444165 318 ntBASIC20.35■□□□□ 0.85
CGREF1Q99674 AL117332.1-201ENST00000622628 974 ntBASIC20.35■□□□□ 0.85
CGREF1Q99674 AC241377.3-202ENST00000626088 1088 ntBASIC20.35■□□□□ 0.85
CGREF1Q99674 AC241585.3-202ENST00000628937 1088 ntBASIC20.35■□□□□ 0.85
CGREF1Q99674 AC245100.8-202ENST00000629247 1058 ntBASIC20.35■□□□□ 0.85
CGREF1Q99674 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CGREF1Q99674 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.35■□□□□ 0.85
CGREF1Q99674 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CGREF1Q99674 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CGREF1Q99674 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CGREF1Q99674 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CGREF1Q99674 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
CGREF1Q99674 OR7E47P-201ENST00000546390 1422 ntBASIC20.35■□□□□ 0.85
CGREF1Q99674 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.35■□□□□ 0.85
CGREF1Q99674 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CGREF1Q99674 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CGREF1Q99674 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CGREF1Q99674 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.34■□□□□ 0.85
CGREF1Q99674 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CGREF1Q99674 AC133637.1-201ENST00000624115 1537 ntBASIC20.34■□□□□ 0.85
CGREF1Q99674 AC104564.3-201ENST00000582367 638 ntBASIC20.34■□□□□ 0.85
CGREF1Q99674 AL451085.2-201ENST00000605085 799 ntBASIC20.34■□□□□ 0.85
CGREF1Q99674 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CGREF1Q99674 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CGREF1Q99674 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CGREF1Q99674 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CGREF1Q99674 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CGREF1Q99674 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.34■□□□□ 0.85
CGREF1Q99674 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CGREF1Q99674 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CGREF1Q99674 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CGREF1Q99674 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CGREF1Q99674 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.33■□□□□ 0.85
CGREF1Q99674 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CGREF1Q99674 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CGREF1Q99674 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CGREF1Q99674 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CGREF1Q99674 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.33■□□□□ 0.84
CGREF1Q99674 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CGREF1Q99674 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.33■□□□□ 0.84
CGREF1Q99674 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CGREF1Q99674 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.33■□□□□ 0.84
CGREF1Q99674 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CGREF1Q99674 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CGREF1Q99674 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.33■□□□□ 0.84
CGREF1Q99674 AC073130.3-201ENST00000624389 2278 ntBASIC20.32■□□□□ 0.84
CGREF1Q99674 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CGREF1Q99674 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CGREF1Q99674 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGREF1Q99674 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.32■□□□□ 0.84
CGREF1Q99674 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.32■□□□□ 0.84
CGREF1Q99674 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.32■□□□□ 0.84
CGREF1Q99674 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGREF1Q99674 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CGREF1Q99674 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.32■□□□□ 0.84
CGREF1Q99674 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CGREF1Q99674 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CGREF1Q99674 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.31■□□□□ 0.84
CGREF1Q99674 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CGREF1Q99674 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.31■□□□□ 0.84
CGREF1Q99674 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CGREF1Q99674 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.31■□□□□ 0.84
CGREF1Q99674 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CGREF1Q99674 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CGREF1Q99674 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CGREF1Q99674 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CGREF1Q99674 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CGREF1Q99674 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CGREF1Q99674 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CGREF1Q99674 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CGREF1Q99674 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CGREF1Q99674 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
CGREF1Q99674 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.3■□□□□ 0.84
CGREF1Q99674 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CGREF1Q99674 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CGREF1Q99674 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms