Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PKP4Q99569 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.92■□□□□ 0.94
PKP4Q99569 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PKP4Q99569 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PKP4Q99569 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PKP4Q99569 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PKP4Q99569 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PKP4Q99569 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PKP4Q99569 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PKP4Q99569 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PKP4Q99569 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PKP4Q99569 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PKP4Q99569 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PKP4Q99569 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PKP4Q99569 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PKP4Q99569 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PKP4Q99569 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PKP4Q99569 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PKP4Q99569 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PKP4Q99569 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PKP4Q99569 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.9■□□□□ 0.94
PKP4Q99569 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.9■□□□□ 0.94
PKP4Q99569 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.9■□□□□ 0.94
PKP4Q99569 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PKP4Q99569 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.89■□□□□ 0.94
PKP4Q99569 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PKP4Q99569 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PKP4Q99569 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PKP4Q99569 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PKP4Q99569 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.89■□□□□ 0.94
PKP4Q99569 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PKP4Q99569 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PKP4Q99569 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PKP4Q99569 ZNRF2P3-201ENST00000424200 374 ntBASIC20.89■□□□□ 0.93
PKP4Q99569 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.89■□□□□ 0.93
PKP4Q99569 AC012414.1-201ENST00000556676 535 ntBASIC20.89■□□□□ 0.93
PKP4Q99569 AL034346.1-201ENST00000568244 1277 ntBASIC20.89■□□□□ 0.93
PKP4Q99569 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.89■□□□□ 0.93
PKP4Q99569 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.89■□□□□ 0.93
PKP4Q99569 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PKP4Q99569 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PKP4Q99569 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PKP4Q99569 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PKP4Q99569 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.89■□□□□ 0.93
PKP4Q99569 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
PKP4Q99569 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.88■□□□□ 0.93
PKP4Q99569 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PKP4Q99569 LINC00565-201ENST00000562710 2331 ntBASIC20.88■□□□□ 0.93
PKP4Q99569 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PKP4Q99569 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PKP4Q99569 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.88■□□□□ 0.93
PKP4Q99569 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.88■□□□□ 0.93
PKP4Q99569 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.88■□□□□ 0.93
PKP4Q99569 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.88■□□□□ 0.93
PKP4Q99569 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.88■□□□□ 0.93
PKP4Q99569 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.88■□□□□ 0.93
PKP4Q99569 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PKP4Q99569 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
PKP4Q99569 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PKP4Q99569 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP4Q99569 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP4Q99569 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP4Q99569 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP4Q99569 AC026471.6-201ENST00000622954 1905 ntBASIC20.87■□□□□ 0.93
PKP4Q99569 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.87■□□□□ 0.93
PKP4Q99569 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.87■□□□□ 0.93
PKP4Q99569 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP4Q99569 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP4Q99569 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PKP4Q99569 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
PKP4Q99569 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.87■□□□□ 0.93
PKP4Q99569 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
PKP4Q99569 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.86■□□□□ 0.93
PKP4Q99569 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PKP4Q99569 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.86■□□□□ 0.93
PKP4Q99569 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PKP4Q99569 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PKP4Q99569 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.86■□□□□ 0.93
PKP4Q99569 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PKP4Q99569 AL354811.1-201ENST00000610286 706 ntBASIC20.86■□□□□ 0.93
PKP4Q99569 MIR6084-201ENST00000622012 110 ntBASIC20.86■□□□□ 0.93
PKP4Q99569 AL358852.1-201ENST00000623174 1268 ntBASIC20.86■□□□□ 0.93
PKP4Q99569 BX005040.4-201ENST00000637145 1518 ntBASIC20.86■□□□□ 0.93
PKP4Q99569 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PKP4Q99569 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PKP4Q99569 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PKP4Q99569 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PKP4Q99569 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PKP4Q99569 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.85■□□□□ 0.93
PKP4Q99569 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PKP4Q99569 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PKP4Q99569 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.85■□□□□ 0.93
PKP4Q99569 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PKP4Q99569 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PKP4Q99569 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.85■□□□□ 0.93
PKP4Q99569 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PKP4Q99569 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
PKP4Q99569 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.85■□□□□ 0.93
PKP4Q99569 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.85■□□□□ 0.93
PKP4Q99569 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms