Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF48Q96MX3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.46■□□□□ 0.39
ZNF48Q96MX3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF48Q96MX3 CROCCP5-201ENST00000436658 830 ntBASIC17.46■□□□□ 0.39
ZNF48Q96MX3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.46■□□□□ 0.39
ZNF48Q96MX3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ZNF48Q96MX3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.46■□□□□ 0.39
ZNF48Q96MX3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.46■□□□□ 0.39
ZNF48Q96MX3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF48Q96MX3 AC011767.1-201ENST00000617410 1153 ntBASIC17.46■□□□□ 0.39
ZNF48Q96MX3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF48Q96MX3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF48Q96MX3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 AC005224.4-201ENST00000583262 1652 ntBASIC17.45■□□□□ 0.38
ZNF48Q96MX3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 AC079834.2-201ENST00000609776 1949 ntBASIC17.45■□□□□ 0.38
ZNF48Q96MX3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.45■□□□□ 0.38
ZNF48Q96MX3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF48Q96MX3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF48Q96MX3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF48Q96MX3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ZNF48Q96MX3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF48Q96MX3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF48Q96MX3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF48Q96MX3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF48Q96MX3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF48Q96MX3 AC006970.2-201ENST00000450065 779 ntBASIC17.43■□□□□ 0.38
ZNF48Q96MX3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.43■□□□□ 0.38
ZNF48Q96MX3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.43■□□□□ 0.38
ZNF48Q96MX3 AC104771.1-201ENST00000603335 964 ntBASIC17.43■□□□□ 0.38
ZNF48Q96MX3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF48Q96MX3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF48Q96MX3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF48Q96MX3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF48Q96MX3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.42■□□□□ 0.38
ZNF48Q96MX3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF48Q96MX3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF48Q96MX3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
ZNF48Q96MX3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF48Q96MX3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ZNF48Q96MX3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
ZNF48Q96MX3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF48Q96MX3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF48Q96MX3 KRT18P11-201ENST00000435214 1283 ntBASIC17.42■□□□□ 0.38
ZNF48Q96MX3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF48Q96MX3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.42■□□□□ 0.38
ZNF48Q96MX3 AC104187.1-201ENST00000607510 612 ntBASIC17.42■□□□□ 0.38
ZNF48Q96MX3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF48Q96MX3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF48Q96MX3 AL117328.2-201ENST00000624617 1940 ntBASIC17.42■□□□□ 0.38
ZNF48Q96MX3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF48Q96MX3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF48Q96MX3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF48Q96MX3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF48Q96MX3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF48Q96MX3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF48Q96MX3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ZNF48Q96MX3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF48Q96MX3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF48Q96MX3 AC009237.3-201ENST00000393279 1427 ntBASIC17.41■□□□□ 0.38
ZNF48Q96MX3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.41■□□□□ 0.38
ZNF48Q96MX3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms