Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF31Q96EP0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF31Q96EP0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF31Q96EP0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF31Q96EP0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF31Q96EP0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF31Q96EP0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.64■□□□□ 0.9
RNF31Q96EP0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
RNF31Q96EP0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RNF31Q96EP0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF31Q96EP0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF31Q96EP0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF31Q96EP0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF31Q96EP0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
RNF31Q96EP0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF31Q96EP0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF31Q96EP0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF31Q96EP0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF31Q96EP0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RNF31Q96EP0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF31Q96EP0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF31Q96EP0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
RNF31Q96EP0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF31Q96EP0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RNF31Q96EP0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
RNF31Q96EP0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF31Q96EP0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF31Q96EP0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF31Q96EP0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RNF31Q96EP0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.63■□□□□ 0.89
RNF31Q96EP0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.63■□□□□ 0.89
RNF31Q96EP0 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.63■□□□□ 0.89
RNF31Q96EP0 AC011767.1-201ENST00000617410 1153 ntBASIC20.63■□□□□ 0.89
RNF31Q96EP0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF31Q96EP0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RNF31Q96EP0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF31Q96EP0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF31Q96EP0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF31Q96EP0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF31Q96EP0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF31Q96EP0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF31Q96EP0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
RNF31Q96EP0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF31Q96EP0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
RNF31Q96EP0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF31Q96EP0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF31Q96EP0 HLA-L-209ENST00000420110 1011 ntBASIC20.62■□□□□ 0.89
RNF31Q96EP0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF31Q96EP0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF31Q96EP0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF31Q96EP0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RNF31Q96EP0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF31Q96EP0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RNF31Q96EP0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF31Q96EP0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RNF31Q96EP0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF31Q96EP0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RNF31Q96EP0 LINC01960-201ENST00000563759 1884 ntBASIC20.61■□□□□ 0.89
RNF31Q96EP0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF31Q96EP0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF31Q96EP0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.61■□□□□ 0.89
RNF31Q96EP0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF31Q96EP0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF31Q96EP0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF31Q96EP0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF31Q96EP0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF31Q96EP0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
RNF31Q96EP0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
RNF31Q96EP0 AC092068.2-201ENST00000590491 1708 ntBASIC20.61■□□□□ 0.89
RNF31Q96EP0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF31Q96EP0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RNF31Q96EP0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF31Q96EP0 C9orf163-202ENST00000624034 2573 ntBASIC20.6■□□□□ 0.89
RNF31Q96EP0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF31Q96EP0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF31Q96EP0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
RNF31Q96EP0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF31Q96EP0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF31Q96EP0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.6■□□□□ 0.89
RNF31Q96EP0 AC079140.4-201ENST00000507448 529 ntBASIC20.6■□□□□ 0.89
RNF31Q96EP0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF31Q96EP0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF31Q96EP0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF31Q96EP0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF31Q96EP0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF31Q96EP0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF31Q96EP0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF31Q96EP0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF31Q96EP0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF31Q96EP0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF31Q96EP0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF31Q96EP0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF31Q96EP0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF31Q96EP0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF31Q96EP0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
RNF31Q96EP0 ID1-201ENST00000376105 1233 ntBASIC20.59■□□□□ 0.89
RNF31Q96EP0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF31Q96EP0 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF31Q96EP0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF31Q96EP0 AC068587.7-201ENST00000641602 218 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms